Gossypium hirsutum (upland cotton): 107959604
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Entry
107959604 CDS
T04793
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16
KO
K14791
periodic tryptophan protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107959604
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
90S particles
Other 90S particles
107959604
Pre-60S particles
Other pre-60S particles
107959604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
EzrA
Motif
Other DBs
NCBI-GeneID:
107959604
NCBI-ProteinID:
XP_016751178
UniProt:
A0A1U8PJ18
LinkDB
All DBs
Position
A05:complement(106299117..106305457)
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AA seq
495 aa
AA seq
DB search
MISAIAWVPKGAAKAEPIVAELPSKEEIEEMIKSGALDRSEDNGDNGSEDEDEDMVAETE
KQTGDVAQALAVADALGKTSKNKSGTQLEDLTDGLKELDMDNYDEEDDGIELFSKGLGDL
YYPSNEMDPFLKDQDDDDSEEVEDMTIRPMDSVIVCARTEDDVSHLEVWIYEDLDEGDSN
MYVHHDVIISAFPLCTAWLDCPIRGGEKGNFVAVGSMEPSIEIWDLDIIDEVQPCLVLGG
TVEKKTKKGKKKPKYKDGSHIGAVLGLAWNKEYRNILASASADKQVKIWDVAAGKCNITM
EHHEGKVQAVAWNHHVPQVLLSGSFDCSVVMKDGRVPTHSGFKWSVTAEVECLAWDPHTE
YSFVVSLEDGTIRGYDIRAAKSDPSSESKPSFTLHAHDKAACTLSYNPAAPNLLATGSMD
KMVKLWDLSNNQPSCVASKNPKAGAVFSISFSQDNPFCLAIGGSKGKLGVWDTLTEITVS
GKFGNYSQQPNRPKA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgatatcggcaattgcatgggtgccgaaaggggcagcaaaggctgaaccaatagtggcc
gagttaccttccaaagaagaaatcgaagagatgatcaagtccggtgccttagatagaagt
gaagataatggtgataatggaagtgaggatgaagatgaagatatggtcgctgaaactgag
aagcaaactggggatgtagcccaagcacttgctgtggcagatgctcttggaaaaacttcc
aagaacaagtcagggacacagctggaagatcttacagatgggttgaaagaacttgacatg
gacaattatgatgaagaggatgatggtattgagttatttagcaaggggcttggtgacctt
tactacccaagcaatgaaatggatccatttttgaaggatcaggatgatgatgattcagaa
gaggttgaggacatgactattagacccatggattctgttatagtttgtgcacgcactgaa
gatgatgttagccatcttgaggtttggatatatgaggatttggatgaaggtgattcaaac
atgtatgttcaccatgatgttatcatttcagcatttcccctttgtactgcatggcttgac
tgtccaattagagggggagaaaaagggaattttgtggcagttggttcaatggagccatca
atagaaatatgggaccttgacattatcgatgaagtacaaccatgtttagtattaggtggc
actgtggagaagaagacaaagaaaggaaagaagaaaccaaaatacaaggatggcagtcat
attggtgctgttcttggtctagcttggaacaaggaatacaggaatatcctcgctagtgca
agtgctgacaaacaagttaagatttgggatgttgctgctggaaaatgcaacataacaatg
gaacatcatgaaggcaaggttcaagcagttgcatggaatcatcatgtgccacaagttctt
cttagtggatcgtttgattgttcagttgtgatgaaagatggaagagtgcccactcattcc
ggttttaagtggtcggtgactgctgaggttgaatgtttggcatgggatccgcacactgag
tactcgtttgtggtgagtcttgaagatggtacaatcagaggatatgatattcgagctgcc
aagtctgatccttcttccgagtcaaaaccaagtttcacactccacgctcacgacaaagct
gcttgcaccctttcatataatccggcagcaccaaatcttcttgcaactggttccatggat
aaaatggtaaaactttgggatttgtcaaacaatcaaccttcatgtgtggcgtccaagaat
cctaaagctggagctgtcttctccatttccttctcacaagataatcccttttgtctggct
attggaggctcaaagggaaaactaggagtttgggatacattaaccgagataaccgtgtcc
ggaaagttcgggaactacagccaacagccgaacagaccgaaagcttaa
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