Gossypium hirsutum (upland cotton): 107959840
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Entry
107959840 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 18-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107959840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107959840
Ion channels [BR:
ghi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107959840
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
107959840
NCBI-ProteinID:
XP_016751477
UniProt:
A0A1U8PJW0
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Position
A05:complement(99675388..99678155)
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AA seq
717 aa
AA seq
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MNSVLPSFRYLPSTSTTTATNATATRPTLQSKDNDNTDFSLLWHYQILDPGSDLVSYWNH
VFLIVCIMALFIDPLYFFLPYVGGPACLASDSSMGVFITVLRSMADLLYLFNMVIKFRTG
FIAPNSRVFGKGELVMDAREIAIRYLKKDFIIDLAATLPLPQFVIWVLIPTTRHSRTDHA
NNTIALIVLLQYVPRLFIIFPLNSKIIKSNGIIAKTAWAGAVYNLLLYVLASHVLGAIWY
LCSIARQFSCWKAECAKENALKVIACIPSFLDCNSLVKPEREYWANVTNVLNNCDASNEE
TDFKFGMFAAAFTNDVASKNFVIKYLYCLWWGIRNLSSYGQNLETTIYIWENVFAIAICL
LGLVLFALLIGNMQTSLQSMTVRIEEWRLKRRDTEEWMRHRQLPEDLQERVRRFVQYKWL
ATRGVDEEFILQSLPLDLRREIQRHLCLSLVRRVPFFAQMDDQLLDAMCERLVSSLSTEG
NYIVREGEPVNEMLFIIRGQLESSTTGGGRTGFFNSITLRPGDFCGEELLTWALMPNSTL
NLPLSTRTVQAVSEVEAFALQADDLQFFAHQFKRLQSKKLQHAFRYYSHQWRTWGACFIQ
AAWRRFKKRKMAKELIKRENSSYYRTLGDQDGYHYNMDDVEERLLDHEDYIDGTSSSSMD
NQQNFQLGATILASKFAXNTKKGSKVPLIDSSADSLKMPKLFKPDEPDFSVDHIENV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcgtactcccttcgttccgctacttaccttccacctccaccaccaccgccacc
aatgccaccgccacacgtcctacactacaatccaaagacaatgataataccgacttctcc
ctactatggcattaccaaatattggaccccggcagcgaccttgtttcctattggaaccat
gtgttcttgattgtttgcattatggcattgttcatagaccctctttacttcttcctccct
tacgtgggggggcctgcatgcttggcctccgactccagcatgggggtcttcatcactgtt
ttaaggtctatggccgatcttttatatcttttcaacatggtaatcaagtttaggacgggt
ttcattgcccccaattctagggttttcggaaagggtgagcttgttatggatgccagggag
attgcgatacggtacttgaagaaggattttatcattgatcttgcagctacattaccacta
cctcagtttgtgatatgggtattgattccaaccacaagacactcaagaacggatcatgca
aacaacaccattgctcttattgtgctccttcaatatgttccaaggttgtttattatcttc
cctcttaactcaaagatcatcaaatccaatggaataattgccaaaacagcttgggctggt
gctgtatacaatctccttctatatgtcctcgccagtcatgtattgggagcaatatggtat
ctgtgttcaatagcgaggcaattctcgtgttggaaagcggaatgcgcgaaggagaatgcc
ttgaaggtgattgcttgcatcccaagtttcttggattgcaatagcttggtgaaaccggag
agggaatattgggcgaatgtgaccaacgtgctcaacaactgcgatgcctccaacgaagag
actgatttcaaattcggaatgtttgcagctgccttcactaatgacgttgcttccaaaaac
tttgttatcaagtacttgtactgcctttggtggggtatcagaaatttaagttcatatggg
caaaatttggagacaaccatatatatttgggagaatgttttcgcaattgccatatgttta
ttaggactggttctgttcgcactcttgattggcaacatgcagacatcattgcaatcaatg
actgtaaggattgaggagtggaggcttaaacgaagggatacagaggagtggatgaggcat
cgtcaattacctgaagatttgcaagaacgtgttcgacgatttgttcaatacaaatggcta
gccactcgaggtgtcgatgaagagtttatattgcaatctttgccgttggatctccgccgc
gaaattcaacgccatttgtgcctttctcttgttcgccgtgttcctttcttcgcacaaatg
gatgaccaacttttggacgcgatgtgcgagcgcctagtctcgtcgttgagtaccgaaggc
aattacatcgtccgagaaggagaaccggtcaacgagatgctcttcatcatccgaggccaa
ctcgagagctccacgactggtggaggaagaactggcttcttcaactccatcaccctccgg
ccaggtgatttttgtggcgaagagcttctgacatgggctctaatgcccaactccaccctc
aacctgcccctctcaactcgaaccgtccaagcagtttcggaagttgaagctttcgcactc
caagccgatgacctccagttcttcgcacatcaattcaaaaggcttcaaagcaagaagctc
cagcacgcattccgatactactctcatcaatggcggacgtggggcgcatgtttcatacaa
gctgcttggagaaggtttaagaagaggaagatggcgaaagagttgattaaaagagagaac
agttcctattacaggacattgggtgatcaagatggttatcattacaacatggatgatgtg
gaagaaaggttactagaccatgaagattacattgacggaacatcatcatcatccatggat
aatcaacaaaattttcaacttggggcaaccattttagcttcaaagtttgctnaaaacact
aaaaaaggatctaaagttcctttgattgattcctctgctgatagtttaaagatgcccaag
ttgtttaaaccagacgagcctgatttctcggtagaccatattgaaaatgtttag
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