Gossypium hirsutum (upland cotton): 107959889
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Entry
107959889 CDS
T04793
Name
(RefSeq) beta-hexosaminidase 1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00511
Other glycan degradation
ghi00513
Various types of N-glycan biosynthesis
ghi00520
Amino sugar and nucleotide sugar metabolism
ghi00531
Glycosaminoglycan degradation
ghi00600
Sphingolipid metabolism
ghi00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ghi00604
Glycosphingolipid biosynthesis - ganglio series
ghi01100
Metabolic pathways
ghi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
107959889
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
107959889
00513 Various types of N-glycan biosynthesis
107959889
00531 Glycosaminoglycan degradation
107959889
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
107959889
00604 Glycosphingolipid biosynthesis - ganglio series
107959889
00511 Other glycan degradation
107959889
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107959889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107959889
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
107959889
Chaperones and folding catalysts [BR:
ghi03110
]
Intramolecular chaperones
Others
107959889
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Motif
Other DBs
NCBI-GeneID:
107959889
NCBI-ProteinID:
XP_016751548
UniProt:
A0A1U8PMI2
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Position
A05:97488613..97496316
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AA seq
546 aa
AA seq
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MLPFSQNSHYKLSFLVLLLWVSRLVDSKSGFELDDSLTYLWPLPSEFTSGNQTLTVDPTL
SFSALGKGGNSKILIEGFERYKKIIFKHVSGISLFDKSRGIRSVYDISELRVIVNSDSEE
LQLGVDESYTLFVAKKDGKSIVGEATIEANTVYGALRGLETFSQLCAFDYETKSVQIYKA
PWYIKDKPRFAFRGLMLDTSRHYLPIDVIKQIIESMSYAKLNVLHWHIIDEESFPLEVPS
YPKLWNGAYTKWERYTIEDASEIVSFAKMRGIHIMAEVDVPGHAESWGAGYPDLWPSSTC
REPLDVSKNFTFDLISGILSDMRKIFPFELFHLGGDEVHTDCWTSTPHIKQWLKDQNMTA
KDAYQYFVLKAQEIAISKNWTPVNWEETFNSFPSKLNPRTIVHNWLGSGVCPRAVAKGYR
CIFSNQGAWYLDHLDVPWNEVYSAEPLEGINNVSEQNLVLGGEVCMWGETADTSDVQQTI
WPRAAAAAERLWSKREAVSARNITLAILPRLHYFRCLLNRRGVQAAPVTNKYARQPPFVA
GSCYEQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgctaccattttctcaaaattctcactataaactgagtttcttggtattattattatgg
gtttctcgccttgttgattcaaagtctgggtttgagttagatgattcgttgacttatctt
tggcctttgccatctgagttcacttctggcaatcaaaccttgaccgtggacccaacttta
tctttctctgccttaggaaaaggagggaactccaagattttgattgaaggatttgagaga
tataagaagattatattcaaacatgtttctgggatttcactttttgataaatcgagaggg
ataagatctgtttatgatattagtgaattgagagtcattgtgaattccgacagtgaagag
cttcaattgggtgtggatgaaagttatactttgtttgtggcaaagaaagatgggaaatct
attgttggagaagccacaattgaggcaaatactgtttatggtgccttaagagggttggag
acattcagccaattgtgtgcttttgattacgagactaagtcggtgcaaatatacaaagca
ccatggtacataaaagataagccaaggtttgcgtttcgtgggcttatgcttgatacatca
aggcactatttaccgattgatgtcattaagcagataattgaatctatgtcttatgccaaa
cttaatgtccttcattggcacatcatagatgaagagtcatttcctctagaagtaccttca
tatccaaaattgtggaatggtgcttatacaaaatgggaacgctatacaattgaggatgcg
agtgaaattgttagctttgccaaaatgagaggcatccatataatggcagaagtagatgtt
cctgggcatgcagagtcatggggagctgggtaccctgatctttggccttcttctacctgc
agagaaccacttgacgtttcaaaaaattttacttttgatttgatttctggcattctatca
gatatgagaaaaattttcccatttgagcttttccacttgggtggagatgaggttcataca
gattgctggacctctactccacacataaagcagtggctcaaagaccaaaacatgactgct
aaagatgcttatcaatattttgtactcaaggctcaagaaatcgcaatctcaaaaaactgg
acgcctgtcaactgggaagaaaccttcaattcttttccgtcaaagcttaatccacgaact
attgtgcacaactggttgggttccggggtttgtccaagggctgttgcgaaaggatacaga
tgcattttcagcaatcaaggtgcttggtatcttgaccatctggatgttccttggaatgaa
gtctatagtgcagagccactagaaggaataaataatgtgtccgagcaaaatcttgttcta
ggaggtgaagtttgcatgtggggcgagacagctgatacatcagatgttcagcaaacaata
tggcctcgagctgctgctgcagcagagcgattatggagcaaaagggaggctgtatctgca
cgaaacattaccttagccatattaccccggcttcattacttcagatgcctattgaatagg
cgcggggttcaagctgctcccgtcacaaacaaatacgctcgacaacctccatttgttgcc
ggatcatgctacgagcaatag
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