Gossypium hirsutum (upland cotton): 107960061
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Entry
107960061 CDS
T04793
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03020
RNA polymerase
ghi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107960061
09124 Replication and repair
03420 Nucleotide excision repair
107960061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107960061
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107960061
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107960061
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107960061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Glyco_transf_99
Motif
Other DBs
NCBI-GeneID:
107960061
NCBI-ProteinID:
XP_016751758
UniProt:
A0A1U8PN55
LinkDB
All DBs
Position
A05:60457815..60459320
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AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAATFTIEREDHTIGNILRMQLHRDENVLFAG
YKLPHPLQYKILVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEVELEKHSRDF
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcccgaccgctacgagagattcgtcgtccctgaggggactaaaaaggtttct
tacgagagagacaccaaaattataaatgcggcgaccttcaccatcgagagagaagaccac
actattggcaacatccttcgaatgcaattgcacagagatgagaatgttttgtttgctggc
tacaagcttcctcaccctctgcagtacaaaatcctagttaggatccacacgaccagtcag
tcttctccaatgcaagcatataatcaggctatcaatgacctggataaggaacttgatcat
ctgaagaatgcatttgaggttgagctagaaaaacattcaagggacttttaa
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