KEGG   Gossypium hirsutum (upland cotton): 107960074
Entry
107960074         CDS       T04793                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 15-like
  KO
K18753  butyrate response factor
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107960074
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107960074
SSDB
Motif
Pfam: zf-CCCH zf-CCCH_4 zf_CCCH_4 zf-CCCH_2 NYD-SP28_assoc APC_N_CC DUF2205 DUF3829_2nd zf-CCCH_11 DUF7491
Other DBs
NCBI-GeneID: 107960074
NCBI-ProteinID: XP_016751775
UniProt: A0A1U8PKQ9
LinkDB
Position
A05:complement(55626560..55630775)
AA seq 310 aa
MQGDGSTLYGDVLAKQPKDKGNEGDYSPSAVAATSLFDLYHPRHVMQQHQDMINRHNLCL
TRLHEASKEVEALRQENTALRSVNRDLSKQLSTLIQASMQNHFATSDYSATPYELLNEFQ
GLCLGSDGGGVGEEEVSDECPTSMMEGAGDVERVMLPKSISVRSNGYLKMMSSQNSQNAG
VSRRRKYRGPTRSGNASQLSGAVNVWPKVYVQGGKKEEEPLELEVYNQGMFKTELCNKWQ
ETAACPYGDHCQFAHGIEELRPVIRHPRYKTEVRRVILAGDVCPYGHRCHFRHAQTEQEK
FMGFLKPSTR
NT seq 933 nt   +upstreamnt  +downstreamnt
atgcaaggcgacggttcaactctttatggcgatgtcctagccaaacaaccaaaagataag
gggaacgaaggagattactccccttcagctgtcgctgccacctctctctttgatctctac
catccccgtcacgtcatgcaacaacatcaagatatgatcaaccgccataatctctgcctc
acgcgcctccacgaagcttctaaagaagtggaggcactccgccaagagaatactgctttg
cgatctgtaaaccgcgacctcagcaagcaactcagcacactgatccaagcctctatgcag
aaccacttcgcaacgtctgattatagcgcgacgccgtacgaattgctgaatgagtttcaa
gggctttgtctcggtagtgacggtgggggcgtaggagaggaagaggtttctgacgagtgt
ccgacgagcatgatggaaggtgctggggatgtggagagggttatgttgcctaagagcata
tctgttaggtctaatggatatctgaagatgatgagtagtcaaaacagtcaaaacgctggt
gtgagtcgtcgtcgtaaatatcggggaccaactcggtctggaaatgcctctcaactcagt
ggagcggtgaatgtgtggccgaaggtgtacgtgcaaggaggaaaaaaggaggaagagcca
cttgaactggaagtgtacaaccaaggcatgttcaagactgaactctgcaacaaatggcaa
gagaccgctgcctgtccatatggtgaccactgccagtttgctcacggcattgaagagctc
cgccctgtaatccgccaccctaggtacaagactgaggttcgcagagtgatccttgctggt
gatgtctgtccctatggtcatcgatgccattttcgccatgcacaaactgaacaagagaag
ttcatgggcttcctcaagccctcgaccaggtaa

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