Gossypium hirsutum (upland cotton): 107960243
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Entry
107960243 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107960243 isoform X1
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107960243
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
107960243
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
107960243
NCBI-ProteinID:
XP_040972326
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All DBs
Position
A06:127205680..127209117
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AA seq
516 aa
AA seq
DB search
MEGSNQNSGSDSGVSSLSLSDDTVNRSSNSGFDNQGVNVYGEYDNGLSMPTNTVEDLNEE
KEEEKEPRTSHQKMGKYFFYDSPLVEDTGVWIPVSVPPMLESDREQWAKGFHSNGGYFPE
GDMGWGEFLSEEKELTMWDVIVEMILAARGKVNALASGDIQRCGVSWLSSHLLEQAWQEM
AQTLNEVNLGNVKEILDAEPPKWLADSAASACMLCGVRFHPIMCSRHHCRFCGGIFCGEC
SKGRSLMPQKFRVTDPQRVCDVCCVRLESVQPYLMDQASNAAQLPTHDLTDLSTLRSWVN
FPWGQSMEHEIYKATNTIRGYITKVGSLKPEKSIPDSILRDAKGLAIISVMKVGVMVTYN
IGTGLVIARREDDSWSPPSAISSFGLGWGAQAGGELTDFIIILRTNDAVKTFSGNAHLSI
GAGVSAAVGIVGRTVEADVRAGDGGYAACYTYSCSKGAFVGCSLKGTVVTTRGRENARFY
GSQSITATDILLGSMPRPPAAAILYRALSDLYNTLS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccaatcaaaattcgggctctgattctggggtttcttctctttccctaagc
gatgataccgttaatcggagctccaactcgggttttgataatcaaggagttaatgtttat
ggagaatatgataatgggttatcaatgccaaccaacactgtggaggacttgaatgaggaa
aaagaagaagaaaaagaaccaaggaccagccatcaaaaaatgggaaagtacttcttttac
gactccccccttgttgaggataccggagtatggataccggtctctgttccaccaatgctc
gaaagcgatcgcgaacaatgggccaaaggttttcattccaatggaggttatttccctgaa
ggtgacatggggtggggtgagtttttgagtgaagagaaggagttgactatgtgggatgtg
atcgtcgagatgatactcgctgcccgtgggaaagtcaacgctttagcttctggtgatatt
caacgatgtggagtttcgtggttatcgagtcatttgcttgagcaagcttggcaagagatg
gctcagacactaaacgaagtgaatttaggtaacgtgaaggaaattctcgatgcggaaccg
ccaaagtggttggctgacagtgcggcttctgcttgtatgctgtgtggtgtgaggtttcac
ccgatcatgtgttcaagacaccattgtaggttttgtggaggaatattttgcggtgagtgt
tctaaaggaaggagtttaatgccccaaaagtttcgtgtaacagacccgcaacgtgtctgc
gatgtatgctgtgtgcggcttgaatcggtccagccatacttgatggaccaggctagtaat
gctgctcagctgccgacacacgatttgactgacttgagtactttgagatcttgggttaat
ttcccctggggacagtctatggaacatgaaatttataaggcaacaaatacgattcggggt
tacattactaaggttggttcattgaaacctgagaaatccattcctgattctattctccga
gatgcaaaaggtcttgccataatctctgttatgaaagtcggtgtcatggttacatacaat
atcggtacgggacttgtgattgctcgtagagaggacgactcctggtctccaccctctgcc
atttcctcattcggtttgggatggggagctcaggctgggggagaattgacggattttatt
ataatcttgagaacgaatgatgctgttaagacttttagcggcaatgcacatctttctatt
ggagctggtgtaagtgctgccgttggtattgttggacggactgtagaagcagatgtacga
gccggcgatggtggttatgctgcttgttatacatacagctgtagtaaaggtgcttttgtt
ggatgttcactcaaagggactgttgttacaacacggggacgagagaatgcccgattttac
ggcagccagtcaataactgcaaccgatatacttctcgggtccatgcctcggccacctgcc
gccgccattctttaccgtgcgctttctgatctatataacacactaagttaa
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