Gossypium hirsutum (upland cotton): 107960289
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Entry
107960289 CDS
T04793
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107960289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107960289
03036 Chromosome and associated proteins [BR:
ghi03036
]
107960289
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107960289
Coactivators
SAGA/TFTC/STAGA complex
107960289
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107960289
STAGA complex
107960289
TFTC complex
107960289
SAGA complex
107960289
SLIK complex
107960289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
107960289
NCBI-ProteinID:
XP_016752092
UniProt:
A0A1U8PP25
LinkDB
All DBs
Position
D06:65190986..65198180
Genome browser
AA seq
629 aa
AA seq
DB search
MAETTSSTSSPKHLQSPNPLLMDPSSSVPTLPPPSAAASNINPTQTATPLTAPSPTTTPT
TNPSSDPSLQNLQQQQQISQISSPPLSNLAQQQQQQQILQQQTQQGVGGLSNFQMQQSLQ
RSPSISRINQLQQQQQQSQQQQQQQSQYGNVLRQQAGLYGQMNFGGSASIQANQQQNQQM
GNPNLSRSALIGQSGHLPMLGGAAAAAAAQYNYQSQLLASPRQKAGLVQGSQFHAGNPTG
QSLHGMQAMGMMNLSSHLRANGALYAQQQMNQGQMRQQLSQQTQLTSPQVQSLQRTSSQA
FINPQLSGLAQNGQPGMMQNSLLQQQLLKQIPSISGPGSTPFRLQRQSQVLLQQQLPFSS
PQLQNSMGLNPQQLSQLVQQQSQMGHPQMQQPQQQLQQQLQQQPQPQLQPQQSPLHQQQQ
QSPRMPGPAGQKTLSLTGSQPNATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDS
QGKLEPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDILLHLEKNWRLTIPGFS
SEERNQTRPLSSDLHKKRLEMVTEIFSTKIRALMESSQPEINANNPKEMIRQGLGNPVGA
NNLMRPSPSSEQLVSQAAGSQMLQQITRY
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaactacttcttcaacatcatcccccaagcatctccagtcgccaaatcccttg
ttgatggacccttcatcatcggttccgacactgccaccgccatcggcggcggcgtcaaat
attaacccgacgcagacggcgactccgctaacagccccatctccgacaacgacaccaaca
acaaatccctcaagtgatccctcactgcaaaatttgcagcagcagcagcaaatctcgcaa
atttcgtctccgcctctttcaaatctcgcccaacaacaacaacagcagcaaatcttgcaa
caacaaacgcaacaaggtgttgggggtttatcaaattttcaaatgcagcaaagccttcaa
agatcaccgtctatttcacgcattaatcaactccaacaacaacaacaacaaagccagcag
caacaacagcaacagtctcaatatggcaacgttttaagacaacaagctgggttgtatggg
caaatgaattttggtgggtcagcttcaattcaagcaaaccaacaacaaaatcaacagatg
ggcaatcctaatttatcaaggtcagctttgattgggcaaagtggtcatttgcctatgctc
ggtggtgcagctgccgccgccgctgctcagtataattatcagtctcagcttttagcttcg
ccgaggcagaaagctgggttggtacaagggtctcagtttcatgcaggaaatccaaccggg
caatctttgcatgggatgcaggcaatggggatgatgaatttgagctcacatttaagggct
aatggagctctttatgctcaacagcagatgaatcagggacagatgaggcagcagttatcg
caacaaactcaactcacatctcctcaggttcaaagcttacaaagaacatcatctcaggca
tttataaacccccagttatcagggctggctcagaatggacaaccgggtatgatgcagaac
tctctcttgcagcaacagttgttgaagcaaataccgtcaatatctggtccagggtcaact
cccttccgccttcagaggcagtcacaagttctcttgcaacagcaactgcctttttcttct
cctcagttgcaaaattctatgggcttgaatcctcaacaattgtctcagctcgtacaacaa
caatcacaaatgggacatcctcaaatgcagcagccacagcaacaactacagcagcagctg
caacaacaacctcaaccgcaattacaaccacaacaatcaccattgcatcagcaacaacag
caatctccgaggatgcccggacctgcaggccagaaaactctcagtttaactggatcacag
cccaatgcaactgcatctggtacaaccacacctgggggaagttcaagccaaggaactgaa
gcgaccaatcaacttctcggaaaaagaaagatacaagatctagtttcacaggttgattcg
caaggaaagctggaaccagaagttgaagatctacttctggagattgctgatgatttcata
gactctgtgactacatttgcatgcagtttggcaaagcatcggaaatcttcaacattagag
tccaaggatatcttgctacatttagagaaaaactggcgtttgactattccaggattttct
agcgaagagcggaaccaaacaagaccgttatcgagtgacctccacaagaagcgtcttgag
atggtgactgaaattttcagtactaaaatacgggcactgatggaatcgtcacagcccgaa
ataaatgcaaataatcctaaagaaatgataagacaaggacttggcaacccagttggtgca
aacaatttaatgagaccttcaccgagttccgagcagttggtttcacaagcagctggttca
caaatgctgcagcaaataacacggtattga
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integrated database retrieval system
