KEGG   Gossypium hirsutum (upland cotton): 107960354
Entry
107960354         CDS       T04793                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ghi01002]
    107960354
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ghi03110]
    107960354
Peptidases and inhibitors [BR:ghi01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   107960354
Chaperones and folding catalysts [BR:ghi03110]
 Other chaperones and cochaperones
  AAA proteases
   107960354
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext TIP49 AAA_5 AAA_17 RuvB_N AAA_16 AAA_22 AAA_28 Mg_chelatase nSTAND3 AAA_33 IstB_IS21 AAA_14 DUF5906 Parvo_NS1 ABC_tran LonB_AAA-LID AAA_7 AAA_24 AAA_18 Sigma54_activat AAA_19 PhoH
Other DBs
NCBI-GeneID: 107960354
NCBI-ProteinID: XP_016752175
UniProt: A0A1U8PLW6
LinkDB
Position
A05:complement(101889861..101894210)
AA seq 675 aa
MAVTVSLSVSHLPGCKVHDFSHLPKPTNKDNPSSKASSDIKLSKRNLLLSSMASGLIGRG
VLVGEPVKAEPETPMESSSSRLSYSRFLQYLDEGGVKKVDLFENGTVAIAEIYNPALEKI
QRVKVQLPGLPQELLRKMKEKNVDFAAHPMEMNWSAALFDLLGNLAFPLVLLGTLLLRSS
SVNNPGGGPNLPFGLGRSKAKFQMEPNTGVTFNDVAGIDEAKQDFQEVVEFLKTPEKFAA
IGATIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFNK
AKANSPCLVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFTGNTGVIVIAATNR
PEILDSALLRPGRFDRQVTVGLPDIRGREEILKVHSDNKRLDKDVSLSVIAMRTPGFSGA
DLANLMNEAAILAGRRGKDKITMKEIDDSIDRIVAGMEGTKMTDGKNKILVAYHEVGHAV
CATLTPGHDPVQKVTLIPRGQARGLTWFIPIEDSDLISKQQLFARVVGGLGGRAAEEVIF
GEPEITTGAAGDLQQVTQIARQMVTKFGMSEIGPWALTDPAVQSSDVVLRMLARNSMSEK
LAEDIDSSVKKITETAYEIAKNHIRNNREAIDKLVEVLLEKETLTGYEFRAILSEFVDEP
VIKVDRTPVREMINA
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggcagtgacagtctctctttctgtctcccaccttcccggctgcaaagttcatgatttc
tctcatctccccaaaccaactaacaaagacaacccatcttctaaagcctcctctgacatc
aaattaagcaaaagaaacctgttgttgagttcaatggcttcgggtcttattggaagaggt
gtcttagttggtgagccggtaaaagctgaaccagagaccccaatggaaagctcatcaagt
agactatcgtattcaaggtttctgcagtacttggatgaaggtggggtgaaaaaggtggac
ttgtttgagaatgggactgtggccattgctgagatatataatcctgcattggagaaaatt
cagagggtaaaagttcagttgccgggattgccccaagaactgttgaggaaaatgaaggag
aaaaacgtggacttcgccgctcatcctatggagatgaactggtcggctgctttattcgat
ttgttggggaatttggcttttcccttggtattgcttggcactttgttgctaaggagctca
tctgttaataatcctggaggaggtcccaacttgcctttcggacttggaaggagcaaagcc
aaatttcagatggaacccaatacaggagtcacatttaacgatgtagctggtattgatgaa
gccaagcaagattttcaagaggtagtggagttcttaaaaaccccagaaaaatttgcagca
attggtgccacaattcccaaaggagtgcttctaattggacctccagggactggtaagaca
ttgctggccaaggccattgcaggggaagcaggggttcctttcttttccctttctggttca
gagttcatcgagatgtttgttggcgttggagcttccagagttagggacctgtttaacaag
gcaaaggctaattccccatgtttggtgttcatcgatgagattgatgctgttggaagacag
agaggaactgggattggtggagggaatgatgaaagggagcaaactttgaatcagctgttg
actgaaatggatggttttactggtaatactggagttattgtcattgctgccactaatagg
cctgaaattctggattctgctttgcttaggcctggaagatttgatagacaggtcactgtt
ggattaccagatataagaggaagggaagaaatattgaaggtacacagcgacaacaagaga
ctagataaggatgtttcactcagtgtaatcgccatgagaacaccgggattcagtggtgct
gatttggcaaatctcatgaatgaagctgccattcttgctggtagaagaggcaaagacaag
atcacgatgaaagagattgacgattcgatcgatcgaatcgttgccggaatggaaggaaca
aagatgacagatggaaagaacaagattctcgtggcgtaccatgaagttggccatgctgta
tgcgcgacattgacaccaggccatgatccagttcaaaaagtgactttgatccctagaggg
caagctcggggtctaacatggttcataccaattgaagattcagatctcatttcaaaacaa
caactctttgctagagttgttggagggctcggcggtcgagcggccgaagaggtaatcttt
ggtgagccagagattactactggtgcagcaggggacctgcaacaagtaactcaaatagcc
agacagatggtgacaaagtttgggatgtcggaaattggaccatgggcgttaactgatcct
gcagtacaaagcagcgacgttgtgttaaggatgcttgcgaggaattccatgtctgagaaa
ctcgctgaagacattgattcatcggttaagaaaataacggaaactgcatacgagattgca
aagaaccatataaggaataaccgtgaagccattgacaagctagtagaagttttgttagag
aaagaaactcttacaggatatgagttcagagcaatcctgtcagaatttgttgatgaacct
gtaataaaagtagatagaactcctgttcgtgagatgatcaacgcttga

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