Gossypium hirsutum (upland cotton): 107960450
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Entry
107960450 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107960450
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
107960450
NCBI-ProteinID:
XP_040938128
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Position
A11:118323533..118327309
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AA seq
591 aa
AA seq
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MCKIQDCILIVTEKKKRDWALRREKGKGTSEREEAVVNASLSNSDINNRRKLILGEAKKA
WDVGKKRTEYLSRFFSSDQADKQSFKTNVPIVTYEDIKPYIDRIANGETSSILFADLITQ
FIRSAGTSGGQQKLIPITIESFEEGKYHRLLADIVVKKCFSDLDEGKSFYLYFSKPDMKT
PSGLVASTYSTFYSKTNTFKNSLAKFCISPIETILCLDNKQIMFFQLLTGLLQRYEVVRL
GSIFASVLARTIKFLEDYWRELCCNIRTGYLRDWIIDPGCKNAMSLILTGPNPELADLIQ
QICEDKSWEGVFKKLWPKIKYISSICTGSMSQYIPLLELYGGGIPLVSPSYVSSEACFGI
NMKPLSNPFDVSYTFLPNTAYFEFLPVNKYGGGKAQETRTIDKPVDLENVKLGQYSEVVV
TTLAGLYRYRVGDVLKVTGFYNGDKTTEEDLSKAITNAKLILEPFGIMLTAYSSYSDTSS
TPGRYVLFWELKMKGSNDLPKLDARVMDQCCCIVEESVDFTYKLFRKDGAISALELRVVK
HGSFDELMDFYTSKGASISQYKPPCWLKSEEAIKILNPGMVGKFFSPKTMS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaaattcaggattgtatcctcatagtaacggagaaaaagaaaagagattgggca
ttaaggagagaaaaagggaaaggaacatcagagagagaggaggcggttgtaaatgcttct
ctttccaattcagacatcaacaatagaagaaaattgatcctcggggaagcgaagaaagct
tgggatgttggaaaaaaaagaacagaatatctatccagattcttctccagtgaccaagca
gacaagcaaagcttcaaaacaaatgttcccatcgttacttatgaagatatcaagccttac
atagatcggattgccaatggagagacctcgtcgatcctttttgctgatctcatcacccag
ttcatccgaagcgctggtacttctggggggcagcagaagttaatacctatcacaattgag
agttttgaggaagggaagtatcatcgtcttctggctgacattgtggtgaaaaaatgtttt
agtgacttagatgaaggcaaatcattctacctatattttagcaaaccagatatgaaaact
ccatctggattagtggcatcaacctactcaacattctattccaagaccaataccttcaaa
aatagcctggctaagttttgcataagtcctattgagaccatcttatgtttggacaacaag
caaattatgttcttccaactgcttaccggtttactacagcgatatgaggtcgtacggctc
ggttcgatctttgcatcggttttggcaaggaccatcaagttcttagaagattattggaga
gaattatgttgtaacattagaacaggttacctcagggattggattattgaccctggttgc
aaaaatgccatgtcattgatccttactgggccaaaccctgaattggctgatttgattcaa
caaatatgtgaagataaatcttgggaaggggtctttaagaaactttggcctaaaatcaag
tatattagttcaatctgtacaggtagcatgagccaatatattccattacttgaactttat
ggaggagggatccctttagtttcaccaagttatgtttcttcggaagcttgtttcgggatc
aatatgaaacccctaagcaatccctttgacgtttcttacacctttctcccaaatacggcc
tacttcgaatttctccctgtgaacaaatatggtggaggaaaggctcaagaaactaggact
atagacaaaccggtcgatcttgagaatgtgaagcttggtcaatactccgaagttgttgtc
acaactttggcaggtctatatcggtacagggtcggagatgttctgaaggtgaccggattc
tataatggagacaaaacaactgaagaagacctttcgaaagcaatcacgaatgcaaaactc
atcctcgaaccatttggcatcatgttgactgcatacagtagctattccgacacctcgtcg
acaccgggtcgatatgtattattttgggagctgaagatgaaaggcagcaatgatttacca
aaacttgatgccagggtaatggatcaatgctgctgtatagtggaagaatccgttgatttt
acgtataaattatttaggaaagatggtgcaatttcagctttagagctaagggtggttaaa
catggaagctttgatgaactcatggatttctatacatcaaagggagcttccatttcccaa
tacaagccaccttgttggcttaaatctgaggaagccataaagatattgaatccagggatg
gtggggaagtttttcagccccaaaacaatgtcttaa
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