Gossypium hirsutum (upland cotton): 107960884
Help
Entry
107960884 CDS
T04793
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107960884
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107960884
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
107960884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
FANCL_C
zf-RING_5
zf_RING_Vps8_fungal
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
107960884
NCBI-ProteinID:
XP_016752628
UniProt:
A0A1U8PQK1
LinkDB
All DBs
Position
D04:complement(4278650..4279401)
Genome browser
AA seq
169 aa
AA seq
DB search
MEGTQETTKTVFPSSTTCTIVSCLGLFCVSKCGIRGSSSVAADSGVIHSAKSGVEENTLN
AFPIVKYASELKLPSLDTACAICLSKFTAGEHLRILPKCNHGFHTPCIDTWLISHSSCRN
CLAETDQKTNNCSQETSSSSAQHQQQHCLKCSIEAEPNAAIGFDHFVPM
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggaagggacacaagaaacgacaaagacagtttttccatcatcaactacttgcaccatc
gtttcctgtcttgggttgttttgtgtttccaagtgtggaatcagaggctcaagttctgtt
gctgctgattctggtgtgatccattcggccaagtcaggagtcgaggaaaataccttaaat
gccttccctattgtaaaatacgcaagcgagttgaaactgccgagccttgacaccgcttgt
gctatatgcttgtccaagttcactgctggggagcatcttcggattttgccgaagtgcaac
catggatttcatactccatgtatagatacttggcttatttcacattcttcatgccggaac
tgcctggctgaaacggaccaaaagaccaataattgcagccaggagaccagcagcagttca
gcacaacaccagcagcaacactgcttgaagtgcagcattgaagctgaaccaaatgcagca
atcggttttgatcattttgttcctatgtaa
DBGET
integrated database retrieval system
