Gossypium hirsutum (upland cotton): 107960904
Help
Entry
107960904 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like isoform X1
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107960904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
107960904
NCBI-ProteinID:
XP_040970357
LinkDB
All DBs
Position
A05:107018700..107024597
Genome browser
AA seq
513 aa
AA seq
DB search
MAMNGYEGGLKMIEELTTNAEQTQDEFWDFRRAAKLMSVTAEYQKKGALYDTLSQSPTMR
HFGDINQAGKRMELMFARPEIETPSGLKAASVLTSVYNESKFRTILPKLYTSPIETIFCP
DPNQGLYCQLLFGLIQRDEVLRVGSLFASTVLRGIKFLENHWQELSYDIKTGRLSDWITD
SGCRNAASLVMKPNPEQADLIENISNCKSWEGIVTKLWPKARYISCVCTGVMRQYIAELE
FYCRGLPLVSTFYACSEALCGINLEPLCKPCDVSYTFLPNMAYFEFLPVENDHDESIEMK
RNDEDTELVDLVNVKVGQCYELVVSTCAGLYRYKVGDVLMVSGFYNNAPQFQFVERKNVI
LNVDQEKTSETDLFKAVIEAKALLDPLGFILTEYTSYVDTSSAPGHYVLFWEIKGKEGKH
CKELDPKIMVECCTRMEESLHYTYKIYRKRNIIAALETRVVKQGSFEALMDYYVSKGTSL
SQYKKPNCIKSEEALKILDSRVIGKYFSPKSPL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaatgggtatgaaggtgggttgaagatgattgaggaactgactacaaatgct
gaacaaactcaagacgagttctgggacttcaggcgggcagccaagctgatgtctgtcact
gctgaatatcaaaagaagggggcattatatgataccttgagccagtctccgacgatgagg
cactttggtgacatcaaccaagccggtaaaagaatggagcttatgtttgccagaccagag
attgaaactcctagtggcctcaaggcagcatctgttttaacgagcgtatacaacgagagt
aagtttagaaccattttgcctaagctttacacaagccccattgagaccatcttttgccca
gaccccaaccagggcttatactgtcaattactttttggtttaatccaacgagacgaggtt
ctcagggttggttcactatttgcatctacggtgctaagaggtatcaagtttctagaaaat
cactggcaagagctatcctatgacataaaaacaggtcgattaagcgattggatcaccgac
tcaggatgcagaaatgcagcctcattggtcatgaagcctaacccagaacaggctgacttg
atagagaacatatctaattgtaaatcatgggaaggaatagtcacaaagctatggcccaaa
gcaaggtatattagttgtgtttgtactggcgttatgagacagtatattgcagaactcgag
ttctattgcagagggctccctttagtttcaactttttatgcttgctcggaagctctttgt
gggattaacttagaacctctatgtaaaccttgtgatgtctcctacacatttctccctaac
atggcttactttgaattccttcctgtggaaaatgatcatgatgaatctattgaaatgaag
aggaacgatgaagatactgaacttgttgatcttgtaaatgtgaaggttggtcaatgttat
gaactagttgtctcaacttgtgcaggattatatcgatataaagttggagatgttcttatg
gtgagtggtttctacaataatgcacctcaattccaatttgtggagaggaaaaatgttatc
ctcaatgttgatcaggaaaaaacaagcgaaacagaccttttcaaggccgtgatagaagca
aaggctcttctcgatccactcggattcatcttgacagagtacactagctatgttgatact
tcttcagcaccaggtcactatgtattattttgggagatcaagggaaaagaagggaagcat
tgcaaagagcttgacccaaagataatggtagagtgttgcactagaatggaagagtcgttg
cattatacatataaaatctataggaaaaggaacataattgcagctctggagactagggtg
gtaaagcaaggaagttttgaggcactaatggattactatgtgtccaaaggaacttcattg
agccaatacaaaaaacctaattgtattaaatctgaggaagccttgaagatattagattcg
agagtgataggaaagtatttcagccccaaatcaccgttataa
DBGET
integrated database retrieval system
