Gossypium hirsutum (upland cotton): 107960905
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Entry
107960905 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107960905
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Motif
Pfam:
GH3
GH3_M
zf_RING-like
Motif
Other DBs
NCBI-GeneID:
107960905
NCBI-ProteinID:
XP_040967985
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Position
A05:106990607..106993371
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AA seq
373 aa
AA seq
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MATNGYECGLKLIKELTTNTEQIQDEVLREILSQNAGTEYLRVFLHGQTEKQLSKKNVPV
VTYEDLKPYIDRIANRETSEILLAKPVTGFYLSSETSGGQPKLILVTAKYQKKGALYGTL
NQSPTMSLIQRDEVVKVGSLFASVVLRGIKFLENHWQELCYDIKTGRLSDWITDSGCRDA
ASLVMKPNPEQADLIENICNCKSWEGIVRKLWPKARYIYCVCTGIMRQYIAELEFYCRGL
PLVSTSYACSEAICGINLEPLCKPCDVSYTFLPNIDTELVDLVNVKVGQCYELVVSTCAV
GDVLMVSGFYNNAPQFQFVERKNVILSVDQEKTSETDLFKAITEAKALLDPLGFILTEYT
SYVDTSSAPGHYV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaatgggtatgaatgtgggttgaagttgattaaggaactgaccacaaatact
gagcaaattcaagacgaggtattgagggaaatactaagtcaaaatgcaggaacagagtat
ttaagggtattcctccatggtcaaaccgagaagcagctctctaagaaaaatgttcccgta
gttacgtatgaagatctcaagccttacatagataggattgctaatagagagacatcagaa
atccttttagctaaacccgttacagggttctatctaagctctgagacttcaggtgggcag
ccaaagctgatacttgtcactgctaaatatcagaagaagggggcattgtatggtaccttg
aaccagtctccgacgatgagtttaatccaacgagacgaggttgtcaaggttggttcactc
tttgcatctgtggtgctaagaggtatcaagtttctagaaaatcactggcaagagctatgc
tatgacataaaaacaggtcgattaagcgattggatcaccgactcaggatgtagagatgca
gcatcattggtcatgaagcctaacccagaacaggctgacttgatagagaacatatgtaat
tgtaaatcatgggaaggaatagtcagaaagctatggcccaaagcaaggtatatttattgt
gtttgtactggcattatgagacagtatattgcagaacttgagttctattgcagagggctc
cctttagtttcaacttcttatgcttgctcggaagctatttgtgggattaacttagaacct
ctatgtaaaccttgtgatgtctcctacacatttctccctaacatagatactgaacttgtt
gatcttgtaaatgtaaaggttggtcaatgttatgaactagttgtctcaacttgtgcagtt
ggggatgttcttatggtgagtggtttctataataatgcacctcaattccaatttgtggag
aggaaaaatgttatcctaagtgttgatcaggaaaaaacaagcgaaacagaccttttcaag
gctataacagaagcaaaggctcttctcgatccactgggattcatcttgacagagtacact
agctatgttgatacttcatcagcaccaggtcactatgtatga
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