Gossypium hirsutum (upland cotton): 107961399
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Entry
107961399 CDS
T04793
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107961399
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107961399
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
107961399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
FANCL_C
zf-C3HC4_3
HP1_ORF34
zf-C2HC5
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_16
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
107961399
NCBI-ProteinID:
XP_016753031
UniProt:
A0A1U8PPC4
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All DBs
Position
D04:complement(4258063..4258736)
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AA seq
189 aa
AA seq
DB search
MTSSTTSTHFPLELLDSFHPRKLLYHPAQEHNFFIINYFHANAATVLLVLSCAIVSSFGL
LCMAKCSFRGSSSVAAESGENSSTKSANVGVKRKALNAFPIVKYATELKLPSLDTTCAIC
LSEFAAGEILRILPKCNHGFHILCIDTWLSSHSSCPTCRHSLVETDQKANNCSQEVPVPM
QETMNIEVN
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttcaacaacatccacccatttccccctagagttgcttgatagcttccatcca
agaaaacttctttaccacccagctcaagaacacaattttttcatcattaactacttccat
gcaaatgcagccactgttctcttagtcctcagttgcgccatcgtttcctcttttgggttg
ctttgtatggccaagtgttcatttagaggctcaagttctgttgctgccgaatctggtgag
aacagttcaaccaagtcagccaatgtaggagttaagcggaaagccttaaatgccttccct
atagtaaaatatgcaaccgagttgaaactgccgagcctagacaccacttgtgctatatgc
ttgtccgagtttgctgctggagagattctgcggatcttgccaaagtgcaatcatggattt
catattctatgtatagatacatggcttagttcacattcttcatgccctacatgccggcac
tccctggttgaaacggaccaaaaggccaataattgtagccaggaagtgcctgtgccgatg
caggaaaccatgaacatagaagtgaactag
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