Gossypium hirsutum (upland cotton): 107961426
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Entry
107961426 CDS
T04793
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107961426
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107961426
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
107961426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf_RING_Vps8_fungal
PHF5
FANCL_C
zf_RING_Vps8
TMCCDC2
Prok-RING_1
Zn_ribbon_IFT122_C
Motif
Other DBs
NCBI-GeneID:
107961426
NCBI-ProteinID:
XP_016753051
UniProt:
A0A1U8PPE6
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All DBs
Position
A05:106864034..106865220
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AA seq
201 aa
AA seq
DB search
MTTSITSTLFSQDLYPRKFLSLHPIESPAISPAQQINSPINDNVHSNAAVILLVLICTII
SSLGLFCMVKCAIRGSSSVASESGVNPSAKLANKGVEKKALNSFPTIKYATELKLTSLDT
ACAICLSEFAAEERLRILPKCNHGFHSQCIDTWLSSHSSCPTCRHCLIEIDQKTDKCSPI
GSLEQPLPVQESIINVNVEEN
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttcaataacatcaacccttttctcccaagacttgtatccaagaaaatttctc
tctcttcacccaatagaatcccctgcaatttccccagctcaacaaatcaattcccccatc
aatgacaacgtccattcaaatgcagccgttattctcttagtcctcatttgcaccatcatt
tcctctttggggttgttttgtatggtcaagtgtgcaattagaggctcaagttctgttgct
tctgaatctggtgtgaacccttcagccaagttagctaataaaggagttgagaagaaagcc
ttaaattccttccctaccataaaatacgcgaccgagttgaaactaaccagcctagacacc
gcttgtgccatatgcttgtcggagtttgctgctgaggagcgtctgcggattttgccaaag
tgcaaccatggatttcattctcaatgtatcgacacttggcttagttcacattcttcatgc
cctacatgcaggcactgcctgatagaaatagatcaaaagaccgataagtgcagcccgata
ggttccttggaacagcctctgccggtgcaagaaagcatcatcaacgttaacgtagaagag
aactga
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