KEGG   Gossypium hirsutum (upland cotton): 107961635
Entry
107961635         CDS       T04793                                 
Name
(RefSeq) DNA cross-link repair protein SNM1 isoform X1
  KO
K15340  DNA cross-link repair 1A protein
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107961635
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    107961635
SSDB
Motif
Pfam: DRMBL SAM_1 SAM_2 Lactamase_B_2 La RMMBL Lactamase_B DUF2799
Other DBs
NCBI-GeneID: 107961635
NCBI-ProteinID: XP_016753181
UniProt: A0A1U8PPT3
LinkDB
Position
A06:23811423..23817894
AA seq 754 aa
MLSRSTASQLIYAAAGDDDDDDFQIPPTQTLSASLKPTSHKTPLKPSNTPHPPFKKRKHS
ANPGKENAVVSAIPATRSDDLPDLHDICGLDLIPSSIDSSFDSTSAQNKESDTGKCDEKK
MESLELTKGYMCNSVEWRLIRPISELSEGFREVCEEDEELDELLKLCDEVEEKEEEVSRE
EEEDNGVENERNGEDKGSVPCPLCGVDITNLNEEQRLVHTNGCLDKVENPPPRVVVHSSV
DSELHSFPEVVDGPLSSPRQVVDVSPVVNWLSGLGLAKYAAAFVREEVDWDTLKWLTEED
LFSIGVTALGPRKKIVHALSELRKEGLRAAEPHMDHPRHEKGSAKSNKRKMQTELSNVAD
DETTKPAVNKLITDYFPGYVSDRKKVCTPTRGQDRSDKGQSSSGRRPVQKNNVKNGKLKD
IPSWCCIPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTKSFSHGKIYCSSITARLVN
LKLGIPWAMLQVLPLNEKINISGIYITCLDANHCPGSIMILFEPPNGKAILHTGDFRYSE
EMGGLSLLHACPIHTLILDTTYCNPQYDFPKQVAVIQFVIEAIQAEAFNPKTLFLIGSYT
IGKERLFLEVARVLRRKVYITAAKLRLLECLGFSEEDMQWFTSNDQESQIHVVPMWTLAS
FKRLKHISNHYARRFNLVVAFSPTGWTFVKGKKKSPGRRWQQGTIIRYEVPYSEHSSFTE
LREFVKLVSPENIIPSVNNEGPDSAKAMISHLLP
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgctctcaagatccactgcatcccagcttatctacgccgctgccggcgacgacgacgac
gacgattttcaaattcccccaactcaaaccctttcagcttccctaaaacctacctcacac
aaaaccccccttaaaccttccaacactccccaccctcctttcaagaaacgcaagcactcc
gctaaccctgggaaagaaaacgccgtcgtttccgccattccagcaactcgatccgatgat
ctccccgatcttcacgatatttgcggcttggatttaataccttccagcatcgattctagt
tttgattcaacctctgctcaaaataaggaatctgatactggaaaatgtgacgagaagaaa
atggagtcattggaattgactaaaggttatatgtgtaattcagtagagtggagattgata
aggccgatatcagaattaagcgagggattccgtgaagtttgcgaggaagatgaggagctt
gatgagttacttaagctatgcgatgaggtggaagaaaaagaagaagaagtgtctcgagaa
gaagaagaagacaatggagttgaaaatgaaagaaatggtgaagacaaaggttcagttccg
tgtccgctttgtggggttgatattacgaatttgaatgaagagcagcggctagttcacacc
aatggttgtctcgacaaggtggagaatccgcctccaagagttgttgttcattctagtgtt
gacagtgagcttcatagctttcctgaggttgtagatggtcccctttcgtctcctcgacaa
gttgttgatgtctcccctgttgttaattggttaagtggtcttggtttagcaaaatatgcc
gcagcttttgtccgagaagaggttgattgggacactctaaagtggttgaccgaagaggat
ttgttcagcataggtgttactgcacttggccctaggaagaagattgtgcatgctcttagt
gaactcagaaaagaaggcttacgtgcagctgagccacatatggatcatcccagacatgaa
aaaggatcagccaaaagcaacaaaagaaagatgcaaaccgagctttctaatgttgcagac
gatgaaactactaaaccagctgtaaacaagttaattacagattattttcctggctacgtt
tctgataggaagaaagtttgcactccaacaagaggacaggataggtctgacaaaggacaa
tcaagttctggtcgaagacctgtgcagaaaaataatgttaaaaatggaaaactaaaagac
attccttcatggtgttgcattcctgggacaccatttcgagtggatgctttcaaatacctt
agaggagattgttcccactggtttctcacgcacttccatatggaccattatcaaggttta
acaaagtcttttagtcatggtaaaatttactgctcctcaatcacagcacggcttgtaaac
ttgaagcttggaatcccatgggcaatgttgcaagttttacccctcaatgaaaagatcaat
atttctggaatttacataacatgcttggatgcaaatcactgcccaggatccatcatgata
ctctttgaaccgcctaacggtaaggctattctccacacaggagattttcgctatagtgag
gaaatgggaggcctgtctcttttgcatgcttgtcctatacatactctcatccttgataca
acttactgtaatcctcagtatgacttcccgaagcaagtagctgttatacagtttgtcatt
gaggcaatccaagcagaggcgttcaatcctaagacactttttctaattggcagctataca
attggaaaggaaaggctattcttggaggttgcacgtgtccttcgtcgaaaggtttacatc
actgcagcaaagctccgtctattggaatgcttggggttctccgaggaagacatgcagtgg
ttcacatctaatgatcaggaaagccagatccatgttgtccctatgtggacacttgcaagc
ttcaaacgactgaaacatatatctaatcattatgcgcgtcgattcaatctagtagttgct
ttctctcccacgggttggacctttgttaagggaaaaaagaaatctccagggagaaggtgg
cagcagggtaccatcataaggtacgaagtaccatatagtgagcatagcagcttcactgag
ctcagagaatttgtgaaacttgtatctccagaaaacataataccaagtgtaaataacgag
ggaccagattctgctaaagcaatgatatcccatttgctaccttga

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