Gossypium hirsutum (upland cotton): 107961639
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Entry
107961639 CDS
T04793
Name
(RefSeq) oligouridylate-binding protein 1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107961639
03041 Spliceosome [BR:
ghi03041
]
107961639
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107961639
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107961639
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
107961639
NCBI-ProteinID:
XP_016753192
UniProt:
A0A1U8PPV7
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Position
A06:21416537..21422513
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AA seq
400 aa
AA seq
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MQQQRLKQQHALMQQALYHNPSLMSGPQIEPILSGNLPPGFDAATCRSVYVGNIHPYVTE
PLLQEVFLSTGPIEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAY
ASNQREDTSGHHNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSKGFGFVSF
RNQQEAQSAINDFNGKWLGSRQIRCNCAAKGATSNNDKSGLDAKGVVEPTNGTSEEGQEK
TNDDAPENNPQYTTVYVGNLAPEVTSVDLHRLFHTLGAGTIEDVRVQRDKGFGFVRYSLH
TEAALAIQMGNARILCGKPIKCSWGSKPTAPGTSSAPLPPPAAAHMPGFSAADLAAYERH
MAMSKYGGAQVMSMMHPQGQAIYDGGYQNVATTQQLMYYQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcaaaggctaaagcagcaacatgctctgatgcaacaggctttgtaccacaat
cccagtctcatgagtggtcctcagatagaacctatcttgagtgggaatcttcctcctggc
tttgatgcagctacttgccgcagcgtatacgtgggaaatattcacccctacgtcacggaa
ccccttctgcaagaagtctttctgagtactggtcccattgaaggatgcaaacttattaaa
aaagataagtcatcgtatggttttgtggactactttgatcgcagatcagctgcccttgct
attgttactctaaatggaaggcatctatttgggcaacctattaaagttaattgggcatat
gctagcaatcagagggaggatacatcaggtcatcacaacatttttgttggtgatctcagc
cctgaagttacagatgctactttgtttgcatgcttttctgtgtactctagttgttcggat
gctagggttatgtgggatcaaaaaactggccgctcgaaaggttttggttttgtttctttc
aggaaccagcaggaagcccagagtgcaattaatgactttaatgggaagtggcttggaagt
agacagatccgttgtaactgtgctgcaaaaggtgccacttccaacaatgacaaatcaggt
ttggatgccaaaggcgttgtagagccgacaaatggaacctctgaagaaggtcaagagaag
actaatgatgatgctccagagaacaatcctcagtataccacggtttatgtgggcaatctt
gccccagaggttacatcagttgatctccacaggcttttccatacccttggagcaggaact
attgaagatgttcgcgtgcaacgagataaaggttttggttttgtgagatacagtttgcat
actgaagcagctttagctatacagatgggaaatgctagaattctgtgcggtaaaccaatt
aagtgttcatggggtagcaagcctactgcaccaggaacaagctctgcccctttgcctcca
ccggctgctgcacatatgcctggtttttcagctgctgatctggctgcctatgaacgacat
atggcaatgagtaaatatggcggtgcacaggtaatgagtatgatgcatccacagggtcaa
gcaatctatgatggtggataccaaaacgttgcaacaactcagcagcttatgtactatcag
taa
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