Gossypium hirsutum (upland cotton): 107961659
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Entry
107961659 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107961659
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107961659
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107961659
03036 Chromosome and associated proteins [BR:
ghi03036
]
107961659
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107961659
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107961659
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107961659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
107961659
NCBI-ProteinID:
XP_016753219
UniProt:
A0A1U8PSG7
LinkDB
All DBs
Position
A06:complement(30934305..30941114)
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AA seq
510 aa
AA seq
DB search
MNNGGAEAAVAPVGGPQPLEWKFSQVFGERTAGEEIQDVDIISAIEFNRTGDHLATGDRG
GRVVLFERTDTLDHVGQRRDLEKMDYPINRHPLFRYKTEFQSHEPEFDYLKSLEIEEKIN
KIRWCQSAYGALSLLSTNDKTIKFWKVQEKQVKKVCDLNVDSTKAMGNGPIVGSSISTSS
KQYMANGGCTSNDFSLPNGGLPSLRLPMVTTLETKLMARCRRIYSHAHDYHINSISNNSD
GETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPIHCNMLAYSSSK
GSIRLIDMRQSALCDIHIKLFEEQEAPGSRSFFTDIIASISDIKFAKDGRHILSRDYLTL
KLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRV
FGCSEGSKKATTLEANKNPMRRQGLTASRPSRSLGSPSGVVRRGKGADNSAVDANGNTFD
FTTKLLHLAWHPTENSIACAASNSLYMYYA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacggcggcgctgaagcagccgtggctccggtgggagggccacaaccactggag
tggaaattctcgcaggtgttcggagagcgaactgccggagaggaaatacaggatgttgat
atcatctccgctattgaatttaatagaactggagatcaccttgctaccggagatcgagga
ggtcgggtggttttgtttgaaaggacagacactctagatcatgttgggcaacggagagat
ctagagaagatggattatccaattaataggcaccctttatttcgctataaaacagagttt
cagagccatgaacctgagtttgactacctcaagagcttggaaattgaggagaaaattaac
aaaattaggtggtgccagtcggcttacggtgctctttctcttttgtcgacaaatgacaaa
acaatcaagttctggaaggtacaagagaagcaggtcaaaaaagtatgtgacttgaatgtg
gattccaccaaagccatgggaaatggtcctattgttggttcaagtatatcaacaagctcc
aaacaatacatggcaaatggaggatgtacaagcaatgacttttcattgccaaatgggggt
ttgccatctttgcgtttgcctatggtaactactcttgagacaaaacttatggccagatgt
cgaagaatatattctcatgcgcatgactatcatattaattccatatccaataacagtgat
ggtgaaacttttatttcggctgacgacctgcgaattaatctctggaacctggaaattagc
aaccaaagttttaacattgttgatgtgaaacctgcaaacatggaggatttgactgaggtg
ataacttcagcagaatttcatcctatacactgtaatatgttagcttacagtagttcaaag
ggttcaattcgtcttattgatatgcgacagtctgcgttgtgtgatatccacattaaattg
tttgaggaacaagaagctccaggctccaggtcttttttcacagatatcatagcatcaatc
tcagacatcaagtttgccaaggatggaagacacatactaagtcgtgactacttgaccctt
aagctgtgggacataaatatggattctggtccagttgcaaccttccaagttcatgaatac
cttaggcctaagctttgtgatttgtatgaaaatgattccatctttgataaatttgagtgt
tgtctaagtggagatggacttcgagtggctactggttcctacagcaatctgtttcgggtg
tttggttgttctgaaggtagcaagaaagcaacaacactggaagccaacaaaaaccccatg
agaagacaaggtctgacagcatcaagaccttcaagatctcttggtagtccttctggtgtt
gttagacgagggaaaggagcagataactcagcagttgatgcaaatggaaatacttttgat
ttcacaacaaagttgctacacctagcatggcatccaactgaaaactccatcgcttgtgcc
gcatcaaacagtctatacatgtactatgcgtga
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