Gossypium hirsutum (upland cotton): 107961679
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Entry
107961679 CDS
T04793
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04016
MAPK signaling pathway - plant
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107961679
04075 Plant hormone signal transduction
107961679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107961679
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107961679
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box
LRR_At5g56370
F-box-like
LRR_RPS2
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
107961679
NCBI-ProteinID:
XP_016753246
UniProt:
A0A1U8PQ03
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Position
A06:37328002..37331772
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AA seq
651 aa
AA seq
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MSKLFAFSGSDDFCPGGSIYPNRKESSLFFYPNQDVYFPPCKRCRVSSPFVFAGGKFEQK
KPSIEILPDECLFEIFRRLPGGQERSTCACVSKRWLTLVSNIRRDEINDNKTTQASDLEY
ESTDKKGGVSSEDVDSDVEGDGYLSRSLDGKKATDVRLASIAVGTASRGGLGKLFIRGSK
SRYGVTTVGLRAISRGCPSLRVLSLWNLSSVGDEGLCEIANGCHQLEKLDLCHCPSITDK
SLLAVAKGCTNLTDLTIEGCANIGNEGLQAIARSCPNLKYVSIKDCPLVGDQGVASLLSS
ASYSLTKVKLQALSITDVSLAIIGHYGKAVTDLSLTSLPNVSEKGFWVMGNGHGLQKLKS
FTVTSCRGATDLGLEAVGKSCPNLKQLCLSKCPFLSDKGLSSLAKAASSLECLQLEECHR
ITQFGFFCSLINCGAKLKVISFANCLGIKDLNSGLPPLSPCESLRSLSIHNCPGFGDASL
FALGKLCPHLQHVELCGLHGITDAGVLPLLESCEAGLLKVNLSGCVNLSDKVVQTISNLH
GWTLELLNLNGCKISDASLVAIGENCQLLTDLDISKCTISDSGIAALAHFNPINLQILSV
SGCSMVSDKSLPSLGKLGETLLGLNLQQCKAISSRAVELLTEQLWRCDILF
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagctctttgcttttagtggaagtgatgatttttgccctggggggtcaatctac
ccaaaccgcaaggagtcaagtctctttttttaccctaaccaggatgtgtatttccctcct
tgcaagaggtgccgcgtcagttccccattcgttttcgctggagggaagtttgagcaaaag
aagccttcaatagagatcctccccgatgaatgcttatttgaaatcttcagacggttacct
ggaggccaagagaggagtacctgtgcttgtgtttccaagcgctggcttacacttgtaagc
aacatccgtagagatgaaatcaatgataataaaaccacccaagcatcagatcttgagtac
gagagtaccgataaaaaaggtggagtttcttctgaggatgtagattcagatgttgagggt
gatggatacctctcaaggagtttggatgggaagaaagcaacagatgttagacttgcatct
attgctgtcggaacagctagtcgtggaggattggggaaacttttcattcgaggaagcaag
tccaggtatggagtaactactgttggcctcagagccatttcccgcgggtgcccttctcta
agggttctttccttgtggaatttgtcttctgttggagatgaaggtctttgcgagattgcc
aacgggtgtcaccagctagagaagctcgacctttgccactgtccctcaattaccgataag
tccttgcttgctgtagcaaagggctgcactaacttgactgatctgaccatcgagggttgt
gcaaacattggaaatgaaggtcttcaagcaatagcacgtagctgtcccaatctaaagtat
gtttccatcaaagattgcccccttgttggagatcaaggagttgcgagcctgttgtcttca
gcctcatattccctcacaaaagtcaagctccaggccttgagcatcactgatgtctctctt
gctattattggacactatggcaaggcagtgaccgacctttctctcactagccttccaaat
gtgagtgaaaagggcttctgggtaatgggtaacggtcatggactacagaaattgaaatct
ttcacagttacatcctgccgtggagcaacagatttgggacttgaagctgttggaaaaagt
tgcccgaatttgaagcagttatgcctcagtaaatgccctttcttatctgataaggggttg
tcgtctttagccaaagcagccagttcactagagtgcttgcaactggaggagtgccacaga
atcactcagtttgggtttttttgctcccttattaactgtggtgcaaagttgaaggttatt
tcttttgcgaactgtttaggcattaaggacctaaactcgggattgccacctctatcccct
tgtgaatcccttagatctttgtccatccataactgccctggtttcggtgatgctagcttg
tttgcgttggggaagttgtgccctcatctgcagcatgtggagttgtgtgggcttcatgga
ataacagatgctggggttctcccgttgctcgagagttgtgaggctggtttgttaaaggtt
aatctcagcggttgtgtgaatttgagcgacaaagttgttcaaacgatctccaacttgcat
gggtggactctagaactgctgaatctcaatggttgcaagatcagcgacgctagtttagtt
gcaattggcgaaaactgtcagttgctaactgatctcgatatctccaagtgcaccatcagc
gattctggaattgcagctctggctcatttcaatccaatcaatctgcagatcctttcggta
tccgggtgctctatggtttcagacaaaagcttgccatcacttggaaaactgggtgagacc
ctcttgggattaaacctacagcaatgcaaagcaatcagcagccgtgccgtggagctactt
acggagcagctatggaggtgtgatatccttttctaa
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