KEGG   Gossypium hirsutum (upland cotton): 107961709
Entry
107961709         CDS       T04793                                 
Name
(RefSeq) protein RRC1 isoform X2
  KO
K12842  U2-associated protein SR140
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107961709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107961709
Spliceosome [BR:ghi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107961709
 Complex B
    107961709
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3
Other DBs
NCBI-GeneID: 107961709
NCBI-ProteinID: XP_016753270
UniProt: A0A1U8PQ12
LinkDB
Position
A06:complement(50665402..50672701)
AA seq 974 aa
MSPFSITRKKTPFQKHREEEEAKKKRAEDETARLYEEFVASFQGDNTPGSKAFVRGGTIN
PNERLKSDSEGEKSKDGMSVPKKGSRYVPSFIPPPLAAKEKESEKEEEERMKEKEKGKSR
NIDHFMEELKHEQEMRERRNLEREHWRDGRHSDSSAPSSRFDELPDDFDPSGKLPGSLDD
ADPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNR
ADGQAAKDEMQGVIVYEYELKIGWGKSVALPSQALPAPPPGQMAIRSKEGSSIILSGPSG
PPVTSLPNQNSELVLTPNIPDIMVTAPEDGQLRHVIDTMALYVLDGGCDFEQAIMERGRG
NPLFNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMVTGSGRWVPPPLPVSKSPE
HEKDSSATYAAGRSRRVDPERPLTDPQRDEFEDMLRALTLERSQIKEAMGFALDNADAAG
EVVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFN
DLYRSVTGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRATFLRSGNSGVAPFHSICG
DAPEIEKKTSSEDAVDGIKANQDTALAMGKSAAMKELMDLPLAELERRCRHNGLSLVGGR
EIMVARLLSLEDAEKQRGYELDDELKLRSSYSRYSSGQRGANVETEVAGLSGRTRYAEDE
IPSQRKGSVPLAETLPIPHPELKAFTKKEKTDPVLPASKWAREDNDSDDEEKRSSKGLGL
SYSSSGSENAGDGHGKADELEFGTEVNIPVPSESAMNEEQRQKLRRLEVALIEYRESLEE
QGIKNAEDIEKRVAIHRKRLESEYGLSDSGEGRKRRSRERRDRRDDVHDSSRKRHRSQSQ
SESPPRKQSNRGRDRENDSEKDRESHRERERYHDLQNERGRERERDRWEKSGSRERDDHD
RDRGRDRDSRRRMK
NT seq 2925 nt   +upstreamnt  +downstreamnt
atgagtccattttcaatcacgcgtaagaaaacgcctttccagaagcacagagaagaggaa
gaagccaagaagaagagggcagaggacgaaactgctcgattatacgaggagtttgtggca
tcgtttcaaggagataatacccctggatcgaaggcatttgttcgaggtggaacaatcaat
cccaacgagaggttgaaatccgattctgaaggtgaaaagtccaaagatgggatgtctgtt
ccaaagaagggaagtaggtatgttccatctttcataccacctcctttggcagccaaggaa
aaggaatctgagaaggaggaggaggagaggatgaaggagaaagagaagggaaagtctcga
aatattgaccattttatggaggagctgaagcatgaacaagagatgagggaaaggagaaat
ctggaacgtgaacattggcgtgatgggcgtcatagtgatagttcagctccatctagtcgc
tttgatgaactgcctgatgattttgatcctagtggaaaattgcccggatcacttgatgat
gctgatcctcaaacgacaaatctctatgttggaaatctctcaccaaaagttgatgaaaat
tttcttctgcggacttttggaagatttggacctattgctagtgtgaaaattatgtggcct
aggacagaggaggagcgaagaaggcaaagaaattgtggttttgtggctttcatgaataga
gctgatggacaagctgcaaaagatgaaatgcaaggagttattgtatatgaatatgaattg
aaaattgggtggggtaaatctgttgctcttccatcacaagcattacctgctcccccacct
ggacagatggctatcaggagtaaggagggtagttctataatcttatctggtccttcaggt
ccaccagtcacatctcttccaaatcagaattctgaactggttcttactccaaatattcca
gatataatggtcactgcacctgaggatggccagctccgccatgtgatagatacaatggct
ctttatgtccttgatggaggatgtgactttgaacaagctattatggagaggggtcgtggc
aatcctctattcaactttttatttgagcttggctcaaaggagcacacttactacgtctgg
aggctatattcttttgcccagggtgatactcttcaaaggtggcggacggagccttttatc
atggtaactgggagtggaagatgggtaccaccacctttgccagtgtcaaaaagtccagag
catgaaaaggactcttctgccacatatgccgcaggaagaagcaggcgggtggacccagaa
aggccacttactgatccacaaagggatgaatttgaggacatgctacgggcattgacattg
gagaggagtcaaataaaggaagccatgggctttgctttggataatgctgatgctgctgga
gaggtagttgaagttttgacagagtctctgacacttaaagaaacacctattccaactaaa
gtagcaaggcttatgcttgtctctgacattcttcataatagcagtgctcctgttaaaaat
gcatctgcataccgtactaaatttgaagcaacattacctgatataatggagagctttaat
gatctgtaccgcagtgtaacaggaaggatcactgctgaagccctaaaggaaagggttctg
aaagtgttgcaagtatggtcagattggtttcttttctcagatgcatacgtgaatggacta
cgagccacttttcttcgatcaggaaactctggagtggccccattccattctatttgtggt
gatgcaccagaaattgaaaagaagactagctcagaagatgcagttgatgggattaaagct
aatcaagatactgcgttggccatgggcaaaagtgcagctatgaaggagttaatggatctc
ccacttgccgagttggaaaggcgctgtaggcataatggattatctcttgttggtggtaga
gaaataatggttgcacgactattaagtctggaagatgccgaaaagcagaggggttatgaa
ctagatgatgagttgaagctgcgctcaagttatagtcggtattctagtggtcagagaggt
gcaaatgttgaaacagaagtggcgggattgtctggacggactcgttatgcagaggatgag
atcccttcacaacgcaaagggtctgtacctctggctgaaacccttccaatcccacatcct
gaactaaaagcattcacaaagaaagagaaaactgatcctgttttgccagcctctaaatgg
gctagagaggataatgacagtgatgatgaagaaaagagaagctccaagggtctggggttg
agctattcatcttctggaagtgagaatgctggtgatggtcatggtaaggctgacgaattg
gagtttggaactgaggtgaacattccagttccatctgaaagtgcaatgaatgaagagcag
aggcaaaagttgagaagacttgaggttgctcttatagaatacagagaatcccttgaggag
caaggaattaaaaatgccgaggatattgaaaaaagggttgcaattcatcggaaacggtta
gaatctgaatatggtttatcagattctggtgaaggaagaaaaagaagatcgagagagagg
agagataggcgggacgatgtgcacgactcttcaagaaagcggcatcgaagtcaaagccaa
agtgagagccctccacggaaacaatccaacagaggcagggatagagaaaatgattcagaa
aaggaccgcgaaagtcacagagaaagagagagatatcatgacctgcaaaatgaaaggggg
agagagagggagcgagaccgctgggaaaagagtggaagcagagaaagagatgaccatgac
agagatagaggtagggatagggatagccgaaggcgaatgaaatga

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