Gossypium hirsutum (upland cotton): 107961723
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Entry
107961723 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107961723
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107961723
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107961723
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107961723
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107961723
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
107961723
NCBI-ProteinID:
XP_016753300
UniProt:
A0A1U8PQ42
LinkDB
All DBs
Position
A06:45092465..45097701
Genome browser
AA seq
695 aa
AA seq
DB search
MHVGGITLDLNWFLQFIFTLFIFAFVALRLLKNTASKYFEVDANFDRDQPMPSIPMDADH
FPCAVCSNPAFKKCSRCKSVRYCSSACQQVDWKDGHKTKCKVNSTQTTTTKPFSGVALVP
VSGTSKIIKKPRKVLFPYDEFVKLFNWEKPGFPPCGLLNCGNSCFANVVLQCLVSTRPLV
AYLLEKGHRKECRRNDWCFMCEFQTHVERSRQSLHPFSPINILSRLPNIGGNLGYGRQED
AHEFMRFAIDTMQSVCLDEFGGEKAVDRNSQETTLIQHIFGGHLQSQVICTNCNKISNQY
ENMMDLTVEIHGDASSLEECLDQFTVREWLHGDNMYKCDGCNDYVKAWKRLTIRWAPNIL
TIALKRFQSGRFGKLNKRVSFPETLDLSPYMSESEDGDDSNIYKLYAVVVHVDMLNASFF
GHYICYTKDFSGNWYRIDDCKVARAELEEVLSQGAYMLLYSRVSARPSCLRTSGINSEAD
HCSKEQIEYVPGKESISSPSRRLSLSMNGSLHSEVPRREIGSSIGMNVDVVPGHENGDVA
NSTPSLSKEVSSKENGSCFQIDLGAIRTNGQDRDSVNSIAVRENVENMDWTSSQPCSSNT
KEVPSCDKDLSSEAEREAENTRMVEVKPQYLPVSKEIKSCEQDPRVAINYVKGDSEDINM
ANSESNSSIAGDNSLKHEVLIQGSETFGREWGKES
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcggcggaataacgttggatctgaattggttcctgcaattcattttcacgctc
ttcattttcgcatttgtggctcttcgcttgctgaagaacacggcgtcgaaatacttcgag
gtcgacgccaatttcgatcgggaccaaccaatgccttccatccccatggatgccgatcac
ttcccttgcgccgtatgctctaatcccgccttcaagaagtgctctcgttgcaaatccgtt
cgttattgctcctcagcctgccaacaggtggactggaaggatgggcataagacaaagtgc
aaagtaaattcaacacaaactacaaccaccaaaccgttttcaggagttgctctggttcct
gtcagtggaacctctaagattatcaagaaaccaagaaaggttcttttcccatacgatgag
tttgtaaagcttttcaactgggagaaaccaggattccctccatgtggactcttaaattgt
ggaaacagttgcttcgctaatgttgttctgcaatgccttgtatccactcgaccactcgtt
gcttacttgttggagaaaggccatcggaaagaatgcagacgcaatgattggtgctttatg
tgcgaatttcaaactcatgttgaacgatcaagacaaagtttgcatccattttcaccaatc
aatattctgtcacggttgcctaatattggaggtaatctcggttatggaagacaagaggat
gctcatgaattcatgaggtttgctattgacactatgcaatcagtttgccttgatgaattc
ggtggagaaaaagctgttgaccgcaactctcaagagacaactcttattcagcatatattt
ggtggtcatctgcagtctcaggtgatttgtactaattgcaataagatttcaaatcagtat
gaaaatatgatggatttgactgttgaaattcatggagatgcttcatcattggaggaatgc
cttgaccagttcaccgttagagagtggcttcatggagataatatgtacaaatgtgatggc
tgcaatgactatgttaaggcatggaagcgccttaccatacgatgggctcctaacattctt
acaattgccttgaaaagatttcagagcggccgatttggaaaactcaacaaaagagtcagc
tttcctgagacgttagatcttagcccttacatgagtgagagtgaagatggggatgattcc
aatatttacaaactttatgcggttgttgtccacgtggatatgttgaatgcatcctttttt
ggtcattacatctgctataccaaagatttctctggaaactggtacagaattgatgactgt
aaggttgcaagggctgaattggaagaggtactttctcagggagcatatatgcttttatat
agcagggtctctgcacgcccatcgtgtcttagaacctctggaatcaactctgaagcagat
cattgctcaaaggaacagattgaatatgtacctggaaaagagtccattagctctcccagt
cgccgtttgtccctgtcaatgaatggtagtttgcattcagaagtccctagacgtgaaatt
gggtcatctattggaatgaatgtggatgttgttcctggacatgagaatggtgatgtggct
aactcaacaccatctctttctaaggaagtttcgtccaaagagaatggatcgtgtttccag
attgatttgggagctatcagaacaaacggtcaagatagggatagtgttaattctatagct
gtgagagaaaatgtggagaacatggactggacaagtagccagccatgttcttctaataca
aaggaggttcccagctgcgataaagatctgagttctgaagctgaaagagaggcagaaaat
acaaggatggttgaagtgaagccgcaatatttaccggtttcaaaagaaataaaaagctgc
gagcaagatcctcgggtagcgatcaattatgtaaagggagattcagaagacataaatatg
gcgaattctgaatcaaattcttctatagcaggggataacagcctgaaacatgaagtgttg
atacagggttcagaaacttttggaagggaatggggtaaagagagctga
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