Gossypium hirsutum (upland cotton): 107961874
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Entry
107961874 CDS
T04793
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107961874
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107961874
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107961874
NCBI-ProteinID:
XP_016753526
UniProt:
A0A1U8PQV0
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Position
D11:53886340..53888173
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AA seq
439 aa
AA seq
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MAAHSYSLFLLISLSFVVQIPTPQAHIAEYDDYWKARKLEAIENLNKAYHPNPEEVVHHY
NDQFAKTMIKLNSTRRVLKGTKENGPCEITNPVDSCWRCDPNWEKNRKRLADCAPGFARG
TTGGKEGEFYVVTDPSDDILNPKPGTLRHAVIQRRPLWITFKGSMIITLEQELIITSNKT
IDARGANVQIAKGAGITVQFVKNVIIHGLHIHHIITGTGGTIRDAEDHFGLRTASDGDGI
SLFGATNIWLDHLSVTNCSDGLIDVIQGSTAVTISNCHFTDHNEVLLFGASDSYTEDQKM
QITVALNHFGKGLVERMPRCRHGFIHVVNNDYTHWLMYAIGGSRNPTIISQGNRYTASST
FASREVTKRVFAPPEVWKKWNWISEGDHFENGAFFVSSGDPKASKKYGTNKMMPFNPGEM
APKLTKYAGTLNCKPGKPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcatagttatagcttgtttctcttaatttccttgtcttttgttgtccaaatc
ccaacccctcaagctcacattgctgaatatgacgattattggaaggcacggaaattggaa
gccattgagaacctgaacaaggcttatcaccccaatcctgaggaggtggtccaccattac
aacgaccaatttgccaaaaccatgattaagcttaatagcaccagaagggtgttgaaggga
acgaaagaaaatggtccatgtgaaataaccaaccccgttgatagctgctggcggtgtgat
cctaactgggaaaaaaacaggaagaggctggccgattgtgcccctggatttgctcgtggt
actaccggtggaaaggagggtgagttttacgtggtcactgacccttctgatgatattctt
aaccccaaacctggaactctgcgtcatgctgtcatccaaagaagaccactttggatcact
ttcaaaggatccatgatcatcaccctggaacaggagctcattattacaagcaacaagacc
attgatgctaggggagccaatgtgcagattgctaagggtgctggtattacggtccagttt
gtcaagaacgtcattatccatggcctccatatccatcacattattaccggcactggtggc
accatcagggatgctgaagaccacttcgggttaaggactgccagcgacggagatgggatc
tctctgttcggagcaaccaacatttggctcgaccatctttcggttaccaattgctccgat
ggtcttatcgatgttattcagggttccactgccgttaccatttccaactgccatttcact
gaccacaatgaggtgttgttgttcggagcaagcgactcctacactgaggaccagaagatg
cagataaccgtcgctttgaaccacttcggtaaaggattggtagagaggatgcctaggtgc
cgacacggttttatccatgtcgtcaacaacgactacactcactggctcatgtatgcaata
ggcggcagtcgcaatcctacaattatcagccagggcaacaggtataccgcgtcatccacc
ttcgcgtctagggaggtgaccaaaagggtgttcgcaccacccgaagtgtggaagaaatgg
aactggatatcagagggtgaccatttcgagaacggtgccttttttgtttcatccggtgat
cccaaagccagcaagaaatacggtaccaacaaaatgatgcctttcaatcccggtgagatg
gcccccaaactcaccaagtatgccggaacactcaactgcaaacccggcaagccttgctaa
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