Gossypium hirsutum (upland cotton): 107961902
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Entry
107961902 CDS
T04793
Name
(RefSeq) 26S proteasome regulatory subunit 6A homolog
KO
K03065
26S proteasome regulatory subunit T5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
107961902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ghi03051
]
107961902
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
107961902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
nSTAND3
AAA_5
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
AAA_14
AAA_7
Mg_chelatase
IstB_IS21
PhoH
AAA_24
TIP49
AAA_19
AAA_33
Parvo_NS1
RNA_helicase
AAA_28
Sigma54_activat
AAA_25
AAA_11
TsaE
ATPase
LMBR1
Motif
Other DBs
NCBI-GeneID:
107961902
NCBI-ProteinID:
XP_016753567
UniProt:
A0A1U8LXQ3
LinkDB
All DBs
Position
A11:120313589..120317163
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AA seq
423 aa
AA seq
DB search
MATAMVEDSSFEEDQLASMTTEDIVRASRLLDNEIRILKEEMQRTNLELDSYKEKVKENQ
EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN
YYA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccatggtcgaagattcgagcttcgaagaggaccagttggcttcgatgacc
accgaggacatcgtccgagcttctcgtcttctagataacgagattcgaattctcaaggag
gagatgcaaaggacaaatctcgagttagattcgtacaaagagaaggttaaagagaatcaa
gaaaagatcaagcttaacaagcaattgccttacttggttggcaacatcgtcgagatatta
gagatgaatcccgaagacgaggcagaggaagatggtgccaacattgatcttgattcacag
aggaagggtaaatgtgttgtactgaaaacctcaactcgtcagaccatctttctacctgtg
gtcggacttgttgaccctgataaattgaagcctggtgatttggttggcgtcaataaagac
agctacttgatattggatactctgccatctgaatacgactctcgagtaaaggctatggag
gttgatgagaaaccaaccgaggattacaatgacattggtgggttggaaaagcagatccaa
gaactagttgaggctattgtgttgcctatgactcataaagaacggtttcaaaagctagga
gttcgaccacccaagggtgtgctcttatacggacctcctggtactggaaaaaccctgatg
gcccgtgcttgtgcggcacaaacaaatgcaacatttctgaagctagcaggtccgcaactg
gttcagatgttcatcggagatggagcgaaacttgtccgtgatgcctttcagcttgcaaaa
gaaaaatctccatgcatcatttttattgatgaaatcgatgcaatcggtacgaagcgtttt
gatagtgaagtgagtggagatagggaggttcaacgaacaatgttggaactgctcaaccag
cttgatggctttagcagtgacgagcgtattaaggtaatagcagctactaaccgagctgat
atccttgaccctgctctcatgcgttccggtcgattggatcgtaaaattgaattcccacat
cccactgaagaagcaagagcccgaatccttcagatccactcaaggaagatgaacgttcat
ccggatgtcaatttcgaagaacttgctcgttcgaccgatgattttaatggagcacagctg
aaagctgtttgcgtagaggcaggcatgctagcacttcgccgagatgcaactgaggtgaat
catgaggatttcaatgaaggtataattcaggttcaagctaagaagaaggcaagcttaaat
tactacgcatga
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