Gossypium hirsutum (upland cotton): 107962064
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Entry
107962064 CDS
T04793
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00730
Thiamine metabolism
ghi00900
Terpenoid backbone biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
107962064
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
107962064
Enzymes [BR:
ghi01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
107962064
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
Transketolase_C_1
PFOR_II
Motif
Other DBs
NCBI-GeneID:
107962064
NCBI-ProteinID:
XP_016753778
UniProt:
A0A1U8PTU0
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Position
A12:complement(63836249..63839383)
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AA seq
707 aa
AA seq
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MAVSASFRPPLPCLKPNLSSYKHLCPKACAGNFEGDEGCNKMRIRKENDGWKIDFSGKKP
ATPLLDTINYPLHMKNLSTRELEQLAAEVRADIVHTVSKTGGHLSSSLGVVELTIALHHV
FDTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVYDAFGAGHSSTS
ISAGLGMAVARDLLKKKNNVISVIGDGAMTAGLAYEAMNNAGFLDSNLIVVLNDNKQVSL
PTATLQGPATPVGALSRALTKIQASAEFRKLREKAKGLTKQIGGQTHEIAAKVDEYARGM
ISASGSTLFEELGLYYIGPVDGHNIEDLVAMFEKVKAMPAPGPVLIHIVTEKGKGYPPAE
AAIDKMHGVVNFNMETGKQFKSKSSTLSYTQYFAESLIKEAEADDKIVAIHAAMGGGTGL
NFFHKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKL
PVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHTVATAAAIDDRPS
CFRFPRGNGTGVVIPHDYKGTPLEIGKGRIIMEGNRVAILGYGSIVQQCIEAANMLRSQN
IYITVADARFCKPLDRDLIKQLANEHEILITVEEGSIGGFGSHVSHFLSLTGILDGPLKL
RAMVLPDRYIDHGSPQDQIEEAGLSSRHISATVLSMLGRPKQAKQFK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctgcctctttccgtcctcctcttccatgtctcaaacctaacctttcttcc
tacaaacatttgtgtcccaaagcctgtgctggaaactttgaaggcgatgagggttgtaat
aaaatgaggataaggaaagaaaacgatggctggaagatcgatttctctgggaagaaaccg
gcaacgccattgttggacaccatcaattaccctcttcacatgaagaacttatcaacaagg
gaacttgaacaactggcggcagaagttagagctgatattgtgcacacagtatctaagacc
ggagggcatcttagctcaagcttaggtgtggtggagttgacaatagctttacaccatgta
ttcgacacacctgatgataaaattatatgggatgttgggcatcaggcataccctcataaa
atcctgacaggaagaaggtccaggatgcataccataagaaaaacttcaggccttgcaggg
tttcctaaaagggatgaaagtgtttatgatgcttttggtgctggacatagttccactagc
atatcagctggactcggtatggcagtggctagagaccttttgaagaagaaaaacaatgtg
atttcagtgattggagatggagctatgactgctggacttgcatatgaggctatgaataat
gcagggttccttgattcgaacttgatcgtcgtgttgaacgacaataaacaagtgtctcta
cctactgcaactctacaaggtcctgctactcctgttggagctcttagtagggctttaacc
aagattcaagcaagcgccgagttccgaaaacttcgggagaaagcaaaaggcctaactaag
caaattgggggtcaaacacatgaaattgctgcaaaagtagatgagtatgcaagaggaatg
attagtgcttctggctccactctctttgaggaactaggcctatattatatcggtccggtt
gatggacacaatattgaagatttagtagctatgtttgagaaagtgaaagcgatgcctgcc
ccggggccggtcctaatccacattgtgacagagaaaggaaagggctatcccccagctgag
gcagcaattgataaaatgcatggtgtcgtaaatttcaacatggaaacaggcaagcagttt
aagtccaagtcctctacactgtcgtatactcagtactttgctgagtcgctcatcaaagaa
gctgaggctgatgacaagattgtagccatccatgcagcaatgggtgggggaacaggtctc
aatttcttccataagaggttcccggaccgctgcttcgatgtggggattgccgagcaacac
gcagttacttttgcagctggtttagccaccgagggtctcaagccattctgtgctatctac
tcatcattcttgcaacggggatatgatcaggtggttcatgatgtggatcttcagaaatta
cctgtacggttcgcaatggatcgagctggtttggttggggcagatggacctacccactgt
ggtgcatttgacattacatacatggcttgcttgccaaacatggtggtaatggctccatcc
gatgaggccgagctcatgcatacggttgcaacagcagcagccatcgatgacagaccaagc
tgcttcagattccctagaggaaatggcactggagtggttatcccacatgattacaaagga
actccacttgagattgggaaaggaagaataattatggaaggcaacagagtagccatcctg
ggatatggttcaatagttcaacaatgcatagaagcagcaaacatgctgcgatcacaaaac
atatacataacagtagctgatgcaagattctgtaagcctctagacagggatctcatcaag
caattagcaaatgagcatgagattcttattactgtggaagagggttccattggaggtttt
ggctctcatgtatcacatttcttgagcttgactggtattttggatggacctctcaagttg
agagcaatggtgcttccagatagatacatagatcatggatcaccccaagaccagatagaa
gaagcagggctgtcttcaaggcatatctctgcaacagtcctatctatgctaggaaggcca
aaacaagccaagcagttcaagtag
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