Gossypium hirsutum (upland cotton): 107962524
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Entry
107962524 CDS
T04793
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107962524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107962524
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107962524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
107962524
NCBI-ProteinID:
XP_016754431
UniProt:
A0A1U8PTG6
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Position
A06:complement(7580750..7594158)
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AA seq
1102 aa
AA seq
DB search
MAAPVPPGAPRPGANSQPPPPRNVNPNYQTNPNSLADNMQNLNLNRPVSMPNSGPRPSPF
GQQPPFPQSGGSAGFPGALPPMARPGPPPGMMGRPAVPPTGPPQSALPANVPPGRPLGQP
SGHSSPFGSRPPPGSLSSSTGGAVLPSSAFPSSGAPSGGVAPPMPGARPNVFMSSPPLTG
PAAPLSRAPAGPLSNGPPAIVSGALPGASQFPLAPSASQPPVGPPLTMMSARAPAQAPTM
RSVLGSPAVTSPPVQPMPSASPFSAVPQARPPPPGSPYGPQTWPMQPQQGAQAPPIPGST
QAQPPRMFGMPQPPTNQAMTTIPPAIGQLGAPLSGPSKIDPNQIPRPIPIPSSSPIVYET
RQGNSANPPPPATSDYVVRDTGNCSPRYMRCTINQIPCTADLLTTSSMQLALLVQPMALP
HPSEDPIQVVDFGESGPVRCSRCKGYINPFMKFIDQGRKFICNLCGFTDETPRDYHCNLG
PDGRRRDADERPELCRGAVEFVASKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACSAI
NQVISDLPEGPRTLVGIATFDSTIHFYNLKRALQQPLMLIVPDIQDVYTPLETDVIVQLS
ECRQHLELLLENIPTMFQSSTTAESCFGAAIKASYLAVKSTGGKLLVFQSVMPSVGIGAL
SSREAEGRTNISAGEKEAHKLLLPADKILKTMAIEFAEYQVCVDVFVTTQTYVDIASISV
IPRTTGGQVYYYYPFSAVSDSAKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQDYSGNFC
KRIPTDIDLPGIDCDKCILVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTNLSLPC
TNMLSNLFRSADLDTQFACLLKRAAIEIPTSPLVQVREQVTNLCINILFSYRKFCATVSS
SGQLILPEALKLLPLYTLALMKSTGLRNDGRIDDRSFWFNYVSSLSTPLAVPLVYPRMFA
IHNLSTKEGDESVLPPIIPLSSEHVSDDGIYFLENGEDALIYFGSSVDSSILQQLFGFTS
VDEAPTQFVIQQYDNPLSKKFNDVVNVVRRQRCSYLRLTLCKKGDPSGMLFFSCMVEDKN
ASSPSYVEFLVHIHRQIQMKMS
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcctgtgcctccaggggcacctagacccggcgccaattcacaaccaccacca
ccacgaaatgttaatcctaattatcaaaccaatcccaattcgttagctgataacatgcag
aatttgaacctaaatcggccagtttcaatgcccaattctggtcctaggccctcccctttt
ggtcaacaacctccctttcctcaatctggaggttcagctggattccccggtgccttgccg
ccaatggcacggcctggtccgccacctggtatgatgggaagacctgcagtgcctcctact
ggaccaccacaatctgctttacctgcaaatgtacccccagggagaccccttggtcaacct
tctggtcactcttccccttttgggtctagacctcctcctggttctttgtcttcttcaaca
ggtggtgctgttctaccttctagcgctttcccatcttcaggtgcacctagcggtggagtt
gcaccaccaatgccaggtgctcgcccgaatgtttttatgtcatctccacctttgactggt
ccagctgcgcccctctctcgtgcacctgctggtcctttgagtaatgggcctccagcaatt
gtttcgggagctttgcctggtgcatcccagtttcctcttgctccaagtgcttcacaacct
cctgttggacctccactaactatgatgtcagctagggctcctgctcaggctccaaccatg
cgttctgttttgggaagtccagctgttacttccccaccagttcaaccaatgccttcagca
tcaccattttcagctgtgcctcaagctagaccaccacctccaggttctccttatggacca
cagacttggccgatgcagcctcagcagggagcccaggctcctcctattcctggatctact
caagcacaacctccaagaatgtttggaatgccacaaccacctacaaatcaagctatgact
accattccacctgctatcggccaactgggagcccctttatcagggccatcgaagattgat
cctaatcaaattccaaggcccattcccattccaagttcctcaccaatcgtgtatgaaact
cgccaaggcaactcggcaaatcctcctccgcctgctactagcgattacgttgtcagagac
actgggaattgcagtcctcgttatatgagatgcaccatcaatcagatcccttgcacagcc
gaccttttgacaacatcgtctatgcagttggctttgttagttcagccaatggctcttcct
catccgtcagaggaccctattcaagttgtggattttggggaaagtggtcctgttcgatgt
tcccgttgcaaaggttacataaatcctttcatgaagttcattgatcagggaagaaagttt
atctgcaatttatgtgggtttactgatgaaactcctcgtgactaccactgcaaccttggt
cctgatggcaggcgtagagatgctgatgaaaggcctgagctgtgtagaggagcagttgaa
tttgttgcttcaaaggagtacatggtccgtgatccaatgccagctgtgtactttttccta
attgatgtatccatgaatgccatacagactggtgctactgctgccgcttgcagtgccatt
aatcaagtcatttctgatcttccagaaggtcctcgaactctggtgggaatagcaacattt
gactcaacaatccatttttataatttaaagcgggccctacaacagccattgatgcttatt
gttcctgacatacaagacgtctatacccctcttgaaacagatgttatcgttcagctttct
gagtgccgccagcatttagaactattgcttgaaaacatcccaacaatgtttcagagtagt
acaactgctgagtcatgttttggtgctgcaatcaaggcttcatacttggccgtgaaaagt
actgggggcaagcttctagtatttcagtcagtcatgccgtctgttggcattggtgccctt
tcttctagagaggctgaaggaagaactaacatatctgctggagaaaaggaggctcataaa
ttacttcttccagcggacaaaattctcaagacaatggcaattgaatttgctgagtatcag
gtttgtgttgatgtatttgtcactactcaaacatatgtcgacattgcttccatctccgtt
ataccaagaacaactggaggccaggtgtattattattaccccttctctgcagtatctgat
tctgcaaagctctacaatgaccttagatggaacatcaccaggccccaaggttttgaggct
gtaatgcgtgtgagatgcagccagggtattcaagttcaagattactctggaaacttttgc
aaacgcattccgaccgacattgacctacctgggattgactgtgacaaatgtatattggta
accctaaagcatgatgacaaattacaagatggttctgaatgtgcttttcagtgtgccctt
ctctataccactgtttatggccaaagaagaattcgagttacaaacttatccttgccatgc
acaaatatgctaagtaatttgtttcgctctgctgacttggatactcagtttgcatgttta
ttaaaacgagctgccattgaaattcctacaagcccacttgtgcaagtgagggaacaagtg
acaaatctttgcatcaacattttgttttcatatcgtaaattttgcgccactgtatcatca
tctggacagcttattcttcctgaggccctgaagctacttcccctatacacccttgcacta
atgaagagtacaggattgcggaatgatggcagaatagatgaccgttccttctggttcaat
tatgtttcctctctttctactcctttggcagtgccattggtttaccctaggatgtttgct
attcacaaccttagtacaaaggaaggagatgagtctgttcttcctcctataatccctcta
tctagtgaacatgtcagcgatgatggaatctattttctggagaatggtgaggatgcttta
atatattttgggagctcagtggattcaagcatcttgcaacaactttttggctttacctca
gttgatgaagcccctactcagtttgtgattcagcaatatgacaatccattatcaaagaag
ttcaatgatgtagtaaatgtggttcggcgccaaagatgttcctatctccgcttgacattg
tgcaagaaaggggatccatcaggaatgctgttcttctcatgcatggtagaagacaagaat
gcaagcagtccctcttatgtcgagtttctcgtacatattcatcggcaaatccaaatgaaa
atgtcataa
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