KEGG   Gossypium hirsutum (upland cotton): 107962667
Entry
107962667         CDS       T04793                                 
Name
(RefSeq) ras-related protein Rab5 isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
ghi04145  Phagosome
ghi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107962667
   04145 Phagosome
    107962667
   04148 Efferocytosis
    107962667
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107962667
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107962667
   04031 GTP-binding proteins [BR:ghi04031]
    107962667
Membrane trafficking [BR:ghi04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    107962667
 Endosome - Lysosome transport
    107962667
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107962667
  Exosomal proteins of other body fluids (saliva and urine)
   107962667
  Exosomal proteins of colorectal cancer cells
   107962667
  Exosomal proteins of bladder cancer cells
   107962667
GTP-binding proteins [BR:ghi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    107962667
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 TsaE SRPRB AAA_16
Other DBs
NCBI-GeneID: 107962667
NCBI-ProteinID: XP_016754627
UniProt: A0A1U8PTY9
LinkDB
Position
A06:12298895..12300674
AA seq 199 aa
MAKTRNKNIQAKLVFLGDMGAGKTSLVSRFVRGQFSDFQESTIGAAFFTQVLSLNEATIK
LDIWDTAGQERYHSLAPMYYRGAAAAVVVYDLTSSESFERAKKWVQELQRQGNPNLIKFL
VANKVDLEEKRKVGNEEGEPYAKENGLNFLETSAKTAHNVNELFYEIAKKLAKAAPSRPT
GMKLHSRPQEMGRRFFCCS
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcaaagacgagaaacaagaacattcaagccaagctggtatttcttggggatatggga
gctgggaaaacaagcttggtatcgagatttgtcagaggccaattttccgatttccaggaa
tcgacaatcggagcagccttcttcactcaggtattgtcactaaatgaagccaccataaag
ttagatatatgggacaccgctggtcaggagagataccacagcttggctcctatgtactac
cgtggcgcagccgctgctgttgtggtctatgatttgactagctcggagtcatttgagcgt
gccaaaaaatgggttcaagaactacaaagacaaggaaatccaaatctgataaagttcttg
gtagcaaacaaggttgacttggaagaaaagagaaaagtgggaaatgaggaaggtgagcca
tatgccaaagaaaatggcttgaatttccttgaaacatctgcaaagactgcacacaacgtc
aatgagcttttctatgaaatagcaaagaagttggcaaaagctgctccgtctcggcctact
ggaatgaagttgcatagcagaccgcaagaaatgggaagaaggttcttctgttgctcctga

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