Gossypium hirsutum (upland cotton): 107962725
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Entry
107962725 CDS
T04793
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107962725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107962725
04147 Exosome [BR:
ghi04147
]
107962725
04090 CD molecules [BR:
ghi04090
]
107962725
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107962725
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107962725
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107962725
CD molecules [BR:
ghi04090
]
Proteins
107962725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
AAA_29
RsgA_GTPase
Zeta_toxin
AAA_21
AAA_30
Motif
Other DBs
NCBI-GeneID:
107962725
NCBI-ProteinID:
XP_016754696
UniProt:
A0A1U8PU77
LinkDB
All DBs
Position
A06:complement(16645383..16651655)
Genome browser
AA seq
1244 aa
AA seq
DB search
MGSAEKTELGKNEFPRERERRHNICIIFRYADWVDILLMVLGTIGAIGDGMSTNWLILFV
SRIMNSLGYGSNSQQNNNNFMGEVEKCTLYFTYLGLGSMVVAFMEGYCWSKTSERQVLKI
RYKYLEAILRQEVGFFDSQEATTSEVINSISKDTSLIQEVLSEKVPLFVMNTTAFFSGLA
FSAYLSWRLALVVFPTILLLIIPGILYGKYLLYISKKASKEYGKANTIVEQALSSIKTVY
SFTAERRIVERYTAILDRAVKLGLKQGIAKGLAVGSTGISFAIWAFVAWYGSHLVMYKGE
SGGRVYTAGLCFILGGLALGVALADLKYFTEATVAAASIFSRIDRTPLIQSEDTKGIVLD
TIRGDIEFDNVNFVYPSRPDSLVLKHFNLKVEAGKTVALVGASGSGKSTAIALVQRFYDA
NDGVVKIDGVDIRTLQLKWIRGKMGLVSQEHALFGTSIKENIMFGKLDATMDEVMTAAMA
ANAHNFIRQLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESE
TLVQNALDQASMGRTTLVVAHKLSTVRNADLIAVVNNGSIIEMGSHNDLINMKDGHYAQL
TKLQRQFSSDDHEQNPETRLPSAGRMSGGRLSTAKSSPSPSPSFFATPLPNIESPKPVSH
PPPSFRRLLSLNSPEWKHGLMGSLSAIAFGAVQPVYALTIGGMISAFFAKSHQEMQARIR
TYAFIFSLLTLLSVILNLIQQYNFAYMGERLTRRIRSRMLEKILSFEAAWFDEEKNSTGA
LCSSLSNQASMVKTLVADRISLLVQTTSAVTIAMIIGLVVAWKLAIVMIAVQPLAIMCFY
TRKVLLSSVSTNFVKAQNQSTQIAVEAVYNHRIVTSFGSLGKVLQLFDEAQEEPRKEARK
KSWLAGIGMGSAQSLTFMSWALDFWYGGTLVQKGEISAGDVFKTFFILVSTGKVIAEAGS
MTSDLAKGSTAVASVFEILDRQSSISPGSQGDGTNGIKLERMSGKIELKKVDFAYPSRPE
TLVLRQFSLEVKPGRSVGLVGKSGCGKSTVVGLIQRFYDVEMGSVRVDGIDIRGLDVQWY
RRQMALVNQEPVIFSGTIRDNIVFGKLDASENEVVEAARAANAHEFISALKEGYETECGE
RGVQLSGGQKQRIAIARAIIRNPKILLLDEATSALDVQSEQVVQEALDRIMVGRTTVVIA
HRLNTIKKVDSIAFVADGKVVEQGTYAQLKNQHGAFSKLASLQT
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgggctctgcagagaagactgagttagggaaaaatgagttcccaagggagagggaaaga
aggcataacatatgcataattttcagatatgctgattgggtcgatattctgctaatggta
ttgggtaccattggagctattggcgatggaatgtcgaccaactggttgatactctttgta
agccgcataatgaacagcttgggttatggtagtaattcccaacaaaataataacaatttt
atgggagaggtcgaaaagtgcaccttatactttacatacttgggactaggaagcatggtg
gtggctttcatggaagggtactgttggagcaaaaccagcgagcggcaagtgctgaagatt
cgttacaagtatttggaagcaattcttagacaagaagttgggttttttgactcacaggag
gctaccacttcagaagtcatcaacagcatatctaaagatacatctctcatacaagaagtc
cttagtgaaaaggttccattatttgtgatgaatacaacagccttcttctcaggcctggca
ttttcagcatatctttcatggaggttggctctagtagttttcccaacaatactattgctg
ataattccaggaatactttatggaaagtaccttttgtatatctccaagaaagcttccaag
gagtatggaaaggcaaacaccatagtggagcaggcactaagctccattaaaacggtgtat
tccttcacagcagaaaggagaatcgtggagagatatacagcaatattggatagggcggtg
aagttgggattgaagcaagggatagccaaagggttggcagtgggaagcacagggatttct
tttgcaatatgggctttcgttgcttggtatggaagtcatttggtaatgtacaaaggagaa
agtggaggaagagtttatacggctggtctctgctttatattgggtggcctggcactcgga
gtagcactggctgatctcaagtacttcacggaagccacggttgccgctgcaagcatcttc
tctaggatcgaccgtactcccctaatccagagcgaggataccaaaggcatcgtgttggac
acaatccgaggagacatagagttcgacaacgtcaatttcgtatacccttctcgacccgat
tccctcgttctcaaacatttcaacctcaaagttgaagcaggcaaaaccgtggcacttgtt
ggtgccagtggaagcggcaaatccaccgccattgctttggtgcaacggttttatgatgcc
aacgatggggtagtgaagatcgatggtgttgatataagaacactgcaattgaaatggatc
agaggtaaaatggggcttgttagtcaagaacatgccttatttgggacttccatcaaggaa
aatataatgttcgggaagctagatgctaccatggatgaagttatgaccgctgccatggct
gctaatgctcataattttataagacagcttcctcaaggctatgaaaccaagataggggaa
cgaggagcactgttgtcaggaggacaaaagcagcgaatcgcgattgctagagccattatc
aagaaccctgtgatactgctacttgatgaggcaacgagtgcccttgattctgaatcagaa
acactagtccaaaatgcacttgatcaggcctccatgggaagaaccaccctagttgttgcc
cacaagctttccactgttcgaaatgcagacctcattgcagttgttaacaatggtagtatc
atagaaatgggatcccacaacgatctcataaacatgaaggacggccactatgcacaactt
acaaagctgcaaagacaattcagctccgatgaccatgaacaaaatccagaaacgcgcctt
ccatctgcaggaagaatgagtggcggcaggctaagcactgccaaatcaagcccaagccca
agccccagtttcttcgctacgccgttgcctaatatcgaaagtccgaaaccagtatctcat
ccccctccttccttccgtaggcttctctctctaaattccccagaatggaagcatggtttg
atgggtagcctctcggctatagcttttggagctgttcaacctgtttatgctttaaccatt
ggtggaatgatttcagccttttttgcaaaaagtcaccaagaaatgcaggctcgaatacgc
acatacgctttcatattttctttgcttacattgctctctgtcattctcaatcttattcag
caatataattttgcttacatgggcgagcggttaaccaggagaatccgaagtcgaatgctg
gaaaaaatattgtccttcgaagccgcttggtttgatgaagaaaaaaactctacaggagct
ttatgctcgagtttgagcaatcaggcttcgatggttaagacactcgtcgcagaccgaatc
tcgttattagttcaaaccacttctgctgttaccatcgcgatgattatcgggctagtcgtg
gcttggaagttagcaatagtgatgattgcagtccaacctctcgcaattatgtgtttctac
acacgaaaagttttgctttctagcgtctcaactaatttcgtcaaggcacaaaatcaaagt
actcaaatagcagtggaagctgtgtataatcatagaattgtaacttcatttgggagccta
ggtaaggttcttcaacttttcgatgaggctcaagaggaaccaaggaaagaggctaggaaa
aaatcatggctagcggggattggtatggggtcagctcaaagcctaacatttatgtcatgg
gctttagatttttggtatggaggtacattggttcaaaagggagagatatctgcaggggat
gtgtttaagacattctttatcttggtgagcactggaaaggtcatagccgaagctggaagt
atgacctcagatctagccaagggctcaactgcagtggcatcggtgtttgagatccttgat
cggcaatcctccatttctccagggtctcaaggagatggcacaaatggaataaagctagaa
agaatgagtggaaagatagagctgaagaaggttgattttgcatatccaagccggccggag
acgctagtgttgcgtcaatttagcttggaggtgaaaccaggcagaagcgttggactagtt
gggaaaagtggatgcgggaaatcaactgtggttggattaatccaaagattttatgatgtt
gaaatggggtcggtgagagtggatggtatcgacataagaggactagacgttcaatggtac
aggaggcaaatggcactggtcaaccaagagccagttatattttcaggcaccatccgggac
aacattgtgttcggaaagcttgacgcatcagagaatgaagttgtggaagcagctagagca
gcaaatgctcatgaattcatctcggcactgaaggaaggatacgaaacagaatgcggagaa
agaggagtgcaattatcaggaggacagaaacaaagaatagctatagctagagctataatt
aggaacccgaaaatacttttactagacgaggcgactagcgctctcgatgtgcaatctgaa
caagttgttcaagaagcattggatcgaatcatggtgggaaggaccacagtggtgatagct
catcggcttaacacaataaaaaaggttgattcaattgcatttgtggccgatgggaaggtt
gtggagcaaggtacctatgctcagctcaagaaccagcacggagcattttccaagcttgca
agccttcaaacataa
DBGET
integrated database retrieval system
