Gossypium hirsutum (upland cotton): 107962732
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Entry
107962732 CDS
T04793
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107962732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107962732
Spliceosome [BR:
ghi03041
]
Complex B
Other components
Prp19-related factors
107962732
Complex C
107962732
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
107962732
NCBI-ProteinID:
XP_016754713
UniProt:
A0A1U8PWG4
LinkDB
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Position
A06:16372961..16376554
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AA seq
607 aa
AA seq
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MAALKDLLPDAKNSTSTYYDHANDPWFKQRFSTSEEEKSTVVTAKPVPPYLKRAGFVPRK
VEDFGDGGAFPEIHIAQYPLDMGRVKGAKPGSKILPVTVDARGNLAYDAIVKQNENAKKI
VYSQHKDLIPKILRNEEEGDDEGEEEEEMQKEIEETMQETKAALEKIVNVRLSAAQPKNV
PKQSSDSKYIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLS
EALYVAEQKAREAVAMRSKVQKEMMMKEKERKEQELRALAAKARSERTGTVAPSTAVPMS
SDRSVMDTDTRVDYEPARERERDMPKESKEEREERLQRAKIREERRRERERERRLEAKDA
AMGKKSKITRDRDRDISEKVALGMASTGAGRGGEVMYDQRLFNQEKGMDSGFATDDQYNI
YDKGLFTAQPTLSTLYRPKKDVDSEMYGGADEQLEKIMKTERFKPDKAFAGTSEKSGPRD
RPVEFEKEVEEADPFGLDQFLTEVKKGKKAMDKVGSGGTMKASAGSSMRDGYEGGSNRSR
INFERGH
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttgaaggatcttttaccagatgcgaaaaactcaacgtcgacctattatgat
cacgcgaatgatccttggtttaaacaacggtttagtacgtcggaggaagagaaatccact
gtcgtaacggcgaagccagtaccgccttacttgaagcgcgccggatttgttcctaggaaa
gttgaagactttggagatggaggagctttccctgaaatacatattgctcaatacccgctt
gatatgggaagggttaaaggggcaaaacctggatcgaagattcttccggtgactgttgat
gctcgtgggaatttggcttatgatgcaatagttaagcagaatgagaatgccaagaagatt
gtttattcgcagcataaggatttaattcctaagattttgaggaatgaggaagagggtgat
gatgagggggaagaagaggaggagatgcaaaaagagatcgaggaaactatgcaagaaact
aaggcggctttagagaagatagttaatgtgagattgagcgctgcacagcctaagaatgtt
ccgaaacagtcttcggattcaaagtatattaagtataagccttcacagcaatcggctgcg
tttaattcaggtgctaaggagaggataattagaatggtagagatgcctgttgatcctctt
gagcctcccaagtttaagcataagagggtacctaaggcttcgggatctccaccagtgcca
gtgatgcattcccctccacgtcctgttactgtgaaggatcagcaggactggaaaattcca
ccttgtatttcaaactggaagaatccaaaagggtatactattccgctggataagcgactt
gctgctgatggaagaggtttacaggaggttcagattaacgataactttgcaaagctgtct
gaggctttgtatgttgcagagcagaaggctagagaagctgtggcaatgagatcaaaggtg
cagaaagagatgatgatgaaggagaaggaaaggaaggagcaggagttgcgagctttagct
gctaaagcccgttctgagagaactgggacggtggcaccatctactgctgttccaatgtca
tctgatagaagtgtgatggatactgatacgagagtggattatgagcctgcgagggaaaga
gaaagggatatgccaaaggaatcgaaggaagaaagggaggagcggttgcagagggcgaag
atacgtgaagagcgtcgtagagaaagggagagagagagaaggttggaggccaaagatgct
gccatgggtaaaaagagtaagattacaagagatagagatagagatattagtgaaaaagtt
gctcttggtatggcttctactggtgctggaagaggtggggaagtaatgtatgatcaaagg
ttatttaaccaggagaaaggaatggattctggatttgcaactgatgatcaatacaacatc
tacgacaagggtctattcacagcgcaacctactctctcgacactctacaggccaaagaaa
gacgtggattcggaaatgtacggtggtgctgatgagcagttagagaaaataatgaaaact
gagaggtttaaacctgacaaggcgtttgctggtacttctgagaagagtggtccaagagac
aggccagttgagtttgaaaaggaagttgaagaagctgatccattcggtcttgaccagttc
ttgacagaggtcaagaagggcaagaaagccatggacaaagtgggtagtggagggacaatg
aaagcaagtgcaggttcgtccatgcgagatggctatgaaggaggatctaatagatctcgc
attaatttcgaaagaggacattaa
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