KEGG   Gossypium hirsutum (upland cotton): 107962732
Entry
107962732         CDS       T04793                                 
Name
(RefSeq) SNW/SKI-interacting protein A
  KO
K06063  SNW domain-containing protein 1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107962732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107962732
Spliceosome [BR:ghi03041]
 Complex B
  Other components
   Prp19-related factors
    107962732
 Complex C
    107962732
SSDB
Motif
Pfam: SKIP_SNW
Other DBs
NCBI-GeneID: 107962732
NCBI-ProteinID: XP_016754713
UniProt: A0A1U8PWG4
LinkDB
Position
A06:16372961..16376554
AA seq 607 aa
MAALKDLLPDAKNSTSTYYDHANDPWFKQRFSTSEEEKSTVVTAKPVPPYLKRAGFVPRK
VEDFGDGGAFPEIHIAQYPLDMGRVKGAKPGSKILPVTVDARGNLAYDAIVKQNENAKKI
VYSQHKDLIPKILRNEEEGDDEGEEEEEMQKEIEETMQETKAALEKIVNVRLSAAQPKNV
PKQSSDSKYIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLS
EALYVAEQKAREAVAMRSKVQKEMMMKEKERKEQELRALAAKARSERTGTVAPSTAVPMS
SDRSVMDTDTRVDYEPARERERDMPKESKEEREERLQRAKIREERRRERERERRLEAKDA
AMGKKSKITRDRDRDISEKVALGMASTGAGRGGEVMYDQRLFNQEKGMDSGFATDDQYNI
YDKGLFTAQPTLSTLYRPKKDVDSEMYGGADEQLEKIMKTERFKPDKAFAGTSEKSGPRD
RPVEFEKEVEEADPFGLDQFLTEVKKGKKAMDKVGSGGTMKASAGSSMRDGYEGGSNRSR
INFERGH
NT seq 1824 nt   +upstreamnt  +downstreamnt
atggcggctttgaaggatcttttaccagatgcgaaaaactcaacgtcgacctattatgat
cacgcgaatgatccttggtttaaacaacggtttagtacgtcggaggaagagaaatccact
gtcgtaacggcgaagccagtaccgccttacttgaagcgcgccggatttgttcctaggaaa
gttgaagactttggagatggaggagctttccctgaaatacatattgctcaatacccgctt
gatatgggaagggttaaaggggcaaaacctggatcgaagattcttccggtgactgttgat
gctcgtgggaatttggcttatgatgcaatagttaagcagaatgagaatgccaagaagatt
gtttattcgcagcataaggatttaattcctaagattttgaggaatgaggaagagggtgat
gatgagggggaagaagaggaggagatgcaaaaagagatcgaggaaactatgcaagaaact
aaggcggctttagagaagatagttaatgtgagattgagcgctgcacagcctaagaatgtt
ccgaaacagtcttcggattcaaagtatattaagtataagccttcacagcaatcggctgcg
tttaattcaggtgctaaggagaggataattagaatggtagagatgcctgttgatcctctt
gagcctcccaagtttaagcataagagggtacctaaggcttcgggatctccaccagtgcca
gtgatgcattcccctccacgtcctgttactgtgaaggatcagcaggactggaaaattcca
ccttgtatttcaaactggaagaatccaaaagggtatactattccgctggataagcgactt
gctgctgatggaagaggtttacaggaggttcagattaacgataactttgcaaagctgtct
gaggctttgtatgttgcagagcagaaggctagagaagctgtggcaatgagatcaaaggtg
cagaaagagatgatgatgaaggagaaggaaaggaaggagcaggagttgcgagctttagct
gctaaagcccgttctgagagaactgggacggtggcaccatctactgctgttccaatgtca
tctgatagaagtgtgatggatactgatacgagagtggattatgagcctgcgagggaaaga
gaaagggatatgccaaaggaatcgaaggaagaaagggaggagcggttgcagagggcgaag
atacgtgaagagcgtcgtagagaaagggagagagagagaaggttggaggccaaagatgct
gccatgggtaaaaagagtaagattacaagagatagagatagagatattagtgaaaaagtt
gctcttggtatggcttctactggtgctggaagaggtggggaagtaatgtatgatcaaagg
ttatttaaccaggagaaaggaatggattctggatttgcaactgatgatcaatacaacatc
tacgacaagggtctattcacagcgcaacctactctctcgacactctacaggccaaagaaa
gacgtggattcggaaatgtacggtggtgctgatgagcagttagagaaaataatgaaaact
gagaggtttaaacctgacaaggcgtttgctggtacttctgagaagagtggtccaagagac
aggccagttgagtttgaaaaggaagttgaagaagctgatccattcggtcttgaccagttc
ttgacagaggtcaagaagggcaagaaagccatggacaaagtgggtagtggagggacaatg
aaagcaagtgcaggttcgtccatgcgagatggctatgaaggaggatctaatagatctcgc
attaatttcgaaagaggacattaa

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