Gossypium hirsutum (upland cotton): 107962752
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Entry
107962752 CDS
T04793
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic isoform X1
KO
K02357
elongation factor Ts
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ghi03012
]
107962752
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107962752
Translation factors [BR:
ghi03012
]
Eukaryotic type
Elongation factors
107962752
Prokaryotic type
107962752
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
107962752
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
RNase_II_C_S1
Spt6_S1
DUF6742
CsrA
Motif
Other DBs
NCBI-GeneID:
107962752
NCBI-ProteinID:
XP_016754734
UniProt:
A0A1U8PWT3
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Position
A06:complement(15784294..15790134)
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AA seq
1083 aa
AA seq
DB search
MTPVIPYSVSNITFIPGAACTVRKNTSLTRCSSSRKHTRYALPSQRFILPLSTSVTSFRK
YGTGYALHGKLGICLSTAGTDVAVEESDSSVTKVSSGGSEIPSDAVETSEDSTSQPDSTP
PTQSKRARPVRKSEMPPVKNEELIPGAMFTGKVRSIQPFGAFVDFGAFTDGLVHVSRLSN
SFVKDVASVVSVGQEVQVRLVEVNTENGRISLSMRENDDASKRQPRKDGPASTDKARPSR
KNASKSSSKKDFKSSKFVKGQELDGTVKNLTRSGAFISLPEGEEGFLPQSEEADDGLMSM
MGNSSLQIGQEVKVRVLRITRGQVTLTMKKEEDDDKLDSQLSQGVVYTATNPFMLAFRKN
KEIAAFLDQREKAEKVEVQPAANVETTTVSTEVDETVVQETDTIAEIVNKDEETAEKEID
DSFEALSPERSGQVPLADVVESDQIAGSSGEVVDQVTSENSVDEESTQKDVVQEEAPLAE
DETSVAASVQEEQIGSIPEEQVETPLAEAKTPSASSVQEEEIGAVPDENGNVASSVVQPD
VTDPKDAEDTVENEAGPDPPQESADDQIKSSGSEAVEEVENQPEDTKDEVQIETPVSKDE
IPSTSEVEEADSAPQKNDEVTDSNGSMSKENVTTAATISPALVKQLREETGAGMMDCKKA
LAETGGDIVKAQEFLRKKGLASAEKKSSRVTAEGRIGSYIHDSRIGVLVEVNCETDFVSR
GDIFKELVDDLAMQVAACPQVQYLVPEDVPEEIVNKEREIEMQKEDLLSKPEQIRSKIVE
GRIQKRIDELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRFNLGEGLEKKSQD
FAAEVAAQTAAKPISSAGKEQSTSVEVKETDEKPKAAVSAALVKQLREETGAGMMDCKKA
LSETGGDLEKAQEYLRKKGLSTADKKSSRLAAEGSIGSYIHDSRIGVLIEVNCETDFVGR
SEKFKELVDVLAMQVVASPQVQFVSIEDIPESIVSKEKELEMQRDDLASKPENIREKIVE
GRVSKRLGELALLEQPFIKDDSLLVKDLVKQTVAALGENIKVRRFVRFTLGETTEDTKTG
TEA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgtgatcccatattctgttagcaacattacattcatccctggagctgcctgt
acagtaaggaagaacactagtttgacaagatgcagttcatcaaggaaacacacgagatat
gctttaccctctcagagattcatcctacctctatcaacctctgttacttcatttcgaaaa
tacggaacagggtatgccttacatggaaaactgggaatttgtttatcaaccgcagggact
gatgtggcggtggaggaatctgattcttctgtgacaaaagtttccagtggaggatccgaa
ataccttcagatgccgttgaaacaagtgaagattcgactagccaaccagattctactcct
ccaactcaatcaaaacgagcaagacctgttaggaaaagtgagatgccacctgtaaagaat
gaggagcttattcctggtgcaatgtttactgggaaagtacgatcaatccaaccatttggt
gcttttgttgattttggagctttcacagatggactggtgcatgtttccaggttgagcaac
agctttgttaaggatgttgcaagtgttgtttctgttggacaagaggtgcaggtgaggtta
gttgaagtaaacactgagaatgggaggatatctctttccatgcgtgaaaatgatgatgct
agtaagcgccagccacggaaagatggtcctgccagtactgataaggcaaggccttccagg
aagaatgcttcaaagtccagctcaaaaaaagatttcaaaagctcaaaattcgtcaaggga
caagaactagatggcacggtaaagaatttaactaggtctggtgctttcatatctctcccc
gagggggaagaaggattcttgccccaatcagaagaagctgatgacggacttatgagcatg
atggggaactcatcactgcaaattggccaagaagtcaaagttcgtgtgctgcgcatcaca
aggggacaggtaaccttgacaatgaagaaagaagaggatgatgacaaattggactcacag
cttagccaaggtgtggtgtacactgcaacaaatccctttatgctggctttccgtaagaat
aaggagattgctgcatttttggatcagagagaaaaggcagagaaagtagaggttcaaccg
gcagctaatgtggagacaaccactgtctctactgaagtggatgaaacagtggtacaggaa
acagatacaatagctgagattgtgaacaaggatgaggaaactgcagagaaggaaatagat
gacagttttgaagcgttgtctcctgaacgtagtggacaagttcctttggcggatgtggtg
gaaagtgatcaaatagctggatcatctggagaagtagttgaccaagtgacttccgaaaat
tcagttgatgaagagtctacacaaaaagatgtagtacaagaggaagctcccctagctgag
gatgaaacatcggttgctgcatcagttcaggaggaacaaatcggaagtattcccgaagag
caggtagaaacacctctagctgaggctaaaactccctctgcttcatctgttcaagaagaa
gaaattggagctgttccggatgaaaatggcaatgttgccagttcagttgtacaaccagat
gttactgatcccaaagatgccgaagatacagtggaaaacgaggcaggtcctgatccacct
caagaatcagctgatgatcagattaagtcttcaggaagtgaagcagttgaagaagtagaa
aatcaacccgaggataccaaggatgaagtgcaaatagagacaccagtttctaaggatgaa
attccttctacttctgaagttgaagaagcagactctgcacctcaaaagaacgacgaggtt
actgattcaaatggctctatgtccaaggaaaatgtgactacagcagcaactatatcaccg
gctctagtaaagcagctccgtgaagaaactggagcaggaatgatggattgcaagaaagca
ctcgcagagactggtggggatattgttaaagctcaggagtttctccgcaagaaaggcttg
gcaagtgcggaaaaaaaatccagtcgagtcactgctgaaggaagaataggttcttacatt
cacgatagcaggattggtgtcctagtagaggttaactgcgagacagattttgtctcacgg
ggtgacatttttaaggagcttgttgatgatctagccatgcaagttgctgcttgccctcaa
gtacaatatcttgttccagaagatgttcctgaggagattgtaaacaaagaaagagaaata
gagatgcaaaaggaagatctcttatctaaaccagaacagattagatcaaagattgttgaa
ggacggatacagaagagaattgacgagttggctttacttgagcaaccctacattaagaat
gacaagatggtggtgaaagattgggtaaagcagactattgcaaccattggagagaacata
aaagtgaaaagatttgtgaggttcaatcttggagaggggctggagaagaaaagtcaggat
tttgctgctgaagtggctgcccaaactgctgcaaaacccatttcttccgctggaaaagag
caatcgacttcagtggaagtcaaggaaactgatgagaaaccaaaagcagctgtctccgcc
gcacttgttaaacaactacgtgaagaaacaggagccgggatgatggactgcaagaaagct
ctgtctgaaaccggaggtgatcttgagaaggctcaggaataccttagaaagaagggccta
tcaactgctgacaagaaatccagccggctcgctgctgaaggcagtattggttcctacatt
catgactcgaggattggtgtactaattgaagtcaactgtgagaccgactttgttggtaga
agtgaaaagttcaaggagttggttgatgtcctagcaatgcaagttgtggccagtccacaa
gtgcagtttgtatccattgaagacattccggagagtatcgtgagtaaagaaaaagagctg
gagatgcaaagagatgatctcgcatctaaaccagagaacattagagagaagatagtggaa
ggcagagtttcaaagaggcttggagagcttgcccttttggaacagcccttcattaaggat
gacagtctgttggttaaagacttggtaaagcaaactgttgcagcacttggagagaacata
aaagtccgaaggtttgttcgatttacacttggagagacaactgaagataccaaaacagga
actgaagcatga
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integrated database retrieval system
