KEGG   Gossypium hirsutum (upland cotton): 107962783
Entry
107962783         CDS       T04793                                 
Name
(RefSeq) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic isoform X2
  KO
K03526  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00900  Terpenoid backbone biosynthesis
ghi01100  Metabolic pathways
ghi01110  Biosynthesis of secondary metabolites
Module
ghi_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    107962783
Enzymes [BR:ghi01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.7  With an iron-sulfur protein as acceptor
    1.17.7.1  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
     107962783
    1.17.7.3  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
     107962783
SSDB
Motif
Pfam: GcpE Sgf11 DUF7575 Zn_ribbon_9
Other DBs
NCBI-GeneID: 107962783
NCBI-ProteinID: XP_016754783
UniProt: A0A1U8PWN8
LinkDB
Position
A08:120733380..120738561
AA seq 740 aa
MASGAVPASFPGLKSKDPGLGFAKSTDFVRICDLRRTKTGRTRISVIRNQNPSQDTAQLQ
PASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTV
EQVMRIADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC
FDKIRVNPGNFADRRAQFEQIEYTNEEYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNHG
SLSDRIMSYYGDSPRGMVESAFEFARICRKLEYHNFVFSMKASNPVVMVQAYRLLVAEMY
VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRMA
DLGMKAAELQRGVAPFEEKHRHYFDFQSRSGQLPKQKEGEEVDFRGVLHRDGSVLMSVSL
DQLKAPELLYKSLAAKLVVGMPFKDLATVDSIILRELPPVDDADARLALKRLIDISMGVI
TPLSEQLTKPLPNAMALVNRKELSTGAYKLLPEGTRLVVSVRGDESYEELEILKDIDATM
LLHNIPFDEEKIGRVHAARRLFEYLSENSLDFPVIHHIQFPNGTHRDDLVINAGTNAGAL
LVDGLGDGILLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAQ
IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEHAT
DALIQLIKDHGRWVDPPAEE
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggcgagtggagctgtaccagcttcttttccaggcttgaaaagcaaggacccaggctta
ggattcgctaaaagtacggattttgtgaggatatgtgatttgagaaggaccaagactggt
agaacaagaatctctgtgattcggaatcagaatcccagtcaggatactgctcaacttcag
cctgcatctgaagggagccctttgttagttccgaggcaaaagtattgtgaatccatacac
aaaactgtgaggagaaaaactaggacggtaatggtcggaaatgtggctcttggtagcgag
catccaataaggattcaaacaatgactacgaccgacactaaggatgtggctgggacagtt
gaacaggtgatgagaatagcagacaagggagcggatattgtccggataactgttcaaggg
aagaaagaggcagatgcatgttttgaaataaaaaactctctggtacagaagaattataat
atacctctggtggcagatattcattttgctccttcagttgcactaagagttgccgagtgc
ttcgataaaattcgagtcaaccctggaaattttgctgatagacgggcccagtttgagcag
atagaatatacaaatgaggagtatcagaaagaacttgagcatattgaggaggtttttact
ccgttggttgaaaaatgtaagaagtatggaagggcaatgcgtattgggaccaaccatggg
agtctttctgaccgtataatgagctactatggggattctcctaggggaatggttgaatct
gcattcgagtttgctaggatatgtagaaagttggagtaccataactttgtcttttcaatg
aaagcgagcaatccagttgttatggtccaggcataccgcctccttgttgctgaaatgtac
gttcatggctgggattatccattacacttgggagtcactgaagctggagaaggtgaagat
ggaaggatgaaatccgcgattggcattgggaccctccttcaggatggtttaggtgacaca
atcagagtttcactcaccgagccacctgaggaagagatagatccatgcagaaggatggct
gaccttggtatgaaagctgccgaactgcagcgaggggtggcaccatttgaggaaaagcac
agacattactttgatttccagagtcgatctggtcaattgccaaaacaaaaggagggcgaa
gaggtggactttagaggtgtcctgcatcgtgatggctcggttcttatgtctgtttctctt
gaccagttgaaggcaccagaactcttatacaagtcacttgcagcaaagctggtcgtaggc
atgccatttaaggacttggcaacagtagactcaatcatactgcgggagcttccaccagta
gatgacgctgatgctcggctggctcttaaaaggttgatagacataagcatgggtgttatt
acacctttatcggaacagctaacaaagccattgcctaatgctatggctctagtaaaccgt
aaggaactatcaactggagcttacaagcttttgcctgaaggtacacgcttggttgtatct
gtacgtggtgacgagtcatatgaagagctggaaatcctgaaagacattgatgctacaatg
cttcttcataatataccttttgatgaagaaaagattggtcgagtgcatgcagcaaggagg
ttatttgagtatctatcggagaacagtcttgatttccctgtaatccaccatattcagttt
ccaaatgggactcacagggatgacttggtcattaatgctggcaccaatgctggagccctt
ctggtggatggactcggagatggtatattgttggaagcaccagaccaagatttcgatttc
ctcagaaacacttctttcaacttactccagggctgtagaatgaggaataccaagacggag
tatgtttcatgcccatcttgtggtagaacattgtttgaccttcaagaaataagtgcacaa
atacgagaaaagacgtcacacttgcctggtgtttcgattgcaattatgggttgcatcgtt
aatggtccgggggaaatggctgatgcagatttcggatatgttggtggtgctccaggaaaa
atcgacctctatgtaggcaagactgttgtgaagcgtggaatcgcaatggagcatgcaacc
gatgctctgatccaactaataaaagatcatgggcgatgggtagatcctcctgctgaagaa
taa

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