Gossypium hirsutum (upland cotton): 107962789
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Entry
107962789 CDS
T04793
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107962789
03036 Chromosome and associated proteins [BR:
ghi03036
]
107962789
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107962789
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107962789
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107962789
microRNA pathway
RISC loading complex
107962789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
107962789
NCBI-ProteinID:
XP_016754788
UniProt:
A0A1U8PWP3
LinkDB
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Position
D08:63103520..63110914
Genome browser
AA seq
913 aa
AA seq
DB search
MDSFEQDGNGAAPDSLPPPPPVPPDVVPIKAEPEPAKKKVVRVPMARRGLGSKGQKITLL
TNHFKVNVGSSDGHFFHYCVSLYYEDGRPVDGKGVGRKVIERVQETYGNELAGKDFAYDG
EKSLFTVGALPNNKHEFTVVLEDVTSNRNNGNASPDVHDDSNGQDRKRIKRPYQSKTFKV
EISFAAKIPMQAIQNALRGQESENSQEALRVLDIVLRQHAAKQGCLLVRQSFFQNNPDNF
TDIGGGVLGCRGFHSSFRASQGGLSLNIDVSTTMIIRPGPVVDFLLANQNARDPYSLDWT
KAKRSLKNLRIKVSPSNQEYKITGLSEQLCKDQLFSLKQKSMKNDNGEAENLEITVYDYF
VNHRNIQLRYSADLPCINVGKPKRPTYIPLELCSLVSLQRYTKALTTFQRASLVEKSRQK
PQERMTVLSSALQRSNYGAEPMLRSCGISISTNFTQVEGRVLPAPRLKVGNGEDFFPRNG
RWNFNNKKLVEPTKIERWAVVNFSARCDTNSLVRDLIRCGDMKGIRIDPPFDVFQESNQN
RRCSPLVRVEKMFEDIQSKLPGAPQFLLCLLPDRKNSDLYGPWKKKNLSEFGIVTQCMAP
TRVNDQYLTNLLLKINAKLGGLNSMLAIEQTPSIPVVSKVPTIILGMDVSHGSPGQSDIP
SIAAVVSSRQWPLISRYRASVRTQSPKLEMIDSLFKKVSDKEDEGIMREVLLDFYTSSGK
RKPDQIIIFRDGVSESQFNQVLNIELDQVIEACKFLDESWNPKFVVIVAQKNHHTKFFQQ
GSPDNVPPGTVIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLLDQIGFSADDLQELVH
SLSYVYQRSTTAISVVAPICYAHLAAAQVGTFMKFEDASETNSSHGGVTAPGAISVPQLP
RLKENVCNSMFFC
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtttgagcaggatggaaatggggcggcacctgactctctgcctccaccccca
cctgtgcctcctgatgtggtgcctatcaaagcagaacctgaacctgcaaagaagaaggtt
gtgcgagtcccaatggccaggcgtggtcttggatctaaagggcagaagataactcttctc
accaatcacttcaaagtgaatgttggaagctctgatggacacttcttccattactgtgtt
tctctttattatgaagatggccgtccagttgatggcaagggtgttggaagaaaagtgata
gagagggtgcaagagacctatggcaatgaattggctggaaaggactttgcttatgatggt
gagaaaagtttatttactgttggtgctcttccaaataacaagcatgagtttacagttgta
cttgaggatgttacatctaacagaaacaacgggaatgcaagccctgatgtccatgatgac
tcaaatgggcaagacaggaagagaattaaacggccttatcagtcaaagacctttaaagtg
gagatcagctttgctgcaaagattcccatgcaagcgattcaaaatgctctgcgtggacag
gaatcagaaaactcacaagaggccctaagggtgttggatatcgttttacggcagcatgct
gcaaaacagggatgtctactcgttcgccaatcattctttcaaaataatcctgataatttt
acagacattggaggtggtgtcctgggctgcaggggcttccattctagcttcagagcctct
caagggggcctttccctgaatattgatgtctcaactaccatgataattcgtcctggtcct
gttgtggactttttgcttgccaatcagaatgctagagatccgtactccctggactggacc
aaggctaaacgaagccttaagaacctgaggataaaggtcagtccatccaatcaggagtac
aagatcactggattgagcgagcagttgtgcaaagatcagttgttttcattgaagcagaaa
agcatgaagaatgataatggtgaagctgagaatctagagattactgtttatgattatttt
gtcaaccatcgcaacatacagttgcgctattctgcagacctgccatgcattaatgtcgga
aagccaaaacggccgacatatattcctttggagctctgttccctggtgtctttgcaacgt
tacaccaaagcgttaaccactttccagagagcttctttggttgaaaaatcaagacagaag
cctcaggaaagaatgacagtcttatccagtgctttacagaggagcaactatggtgctgag
ccaatgctgcgttcttgtggtatttctatcagcactaatttcacccaagtcgaaggtcgt
gttctgccagcgccaaggttaaaagtggggaatggtgaagatttctttcctcggaacggg
agatggaattttaataacaagaaattagtggagccaactaagattgaaagatgggctgtt
gtcaacttctctgcacgatgtgatacgaatagccttgtccgggatctgattagatgtgga
gacatgaaaggaattcggatagaccctccatttgatgtgttccaagagtccaatcagaac
agacgttgctctcctttggttagagtcgagaaaatgtttgaggatatccaatctaaactt
cctggagctccacagtttcttctttgtcttttacctgataggaaaaattctgatctttat
ggtccatggaagaagaagaatctttctgagtttggcatagtcactcagtgcatggctcca
actagggtcaatgatcagtaccttacaaacctgcttctaaaaatcaatgcaaagcttgga
ggactgaattccatgctagcaattgagcaaacaccttcaattccagttgtttcaaaggtt
ccaaccatcatccttggcatggatgtgtctcatggctctcctgggcagtctgatattcca
tcaattgctgcggtggtcagctccaggcagtggcctttgatttcccgctatagagcatct
gttcgtacacaatctcctaagcttgaaatgatagattctctattcaaaaaagtgtctgac
aaggaggatgaaggtatcatgagggaggttctcttggacttctatacaagttcaggaaag
aggaagcctgatcaaattatcatattcagggatggagttagcgagtcacagttcaatcaa
gtattgaacattgaactggatcaagtaattgaggcttgcaaatttcttgatgagagttgg
aaccccaagtttgtggtcattgtggcacagaaaaaccatcatactaagtttttccagcag
ggatctcctgacaatgtcccgcctggaaccgttatagacaacaaaatctgtcatcctaag
aacaatgacttctatctttgtgcccatgctggaatgattggaaccacgaggcctactcat
tatcatgttctcttagatcagattgggttttcggctgatgatctgcaggaactagtccac
tctctgtcgtatgtgtatcaaaggagcaccactgccatatctgtagttgctcctatttgc
tatgcacatttggcagccgcacaggtgggtacattcatgaagtttgaagatgcctcagag
acaaactcgagccatggtggagttaccgcacctggagccatttctgtccctcagctgccg
aggttgaaggagaacgtctgcaattccatgttcttctgctga
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