Gossypium hirsutum (upland cotton): 107962914
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Entry
107962914 CDS
T04793
Name
(RefSeq) trafficking protein particle complex II-specific subunit 120 homolog isoform X1
KO
K20306
trafficking protein particle complex subunit 9
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107962914
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
107962914
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
TPR_12
Motif
Other DBs
NCBI-GeneID:
107962914
NCBI-ProteinID:
XP_016754968
UniProt:
A0A1U8PX76
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Position
A06:complement(39140338..39147778)
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AA seq
1200 aa
AA seq
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MEPDVSIETSCMIRIAVLPIGKVPPPLLRDYHSMLLPHHTIPLSTISSFYTEHQKSPFAH
QPWDTGSLQFKFLLGGSPPSPWEDFQPYRKFLSVIGICHCPSSPDLDHVIDQFNAACKIY
TSALVLRCFAFCPGNSQLDDGKKRENLVLFPPADRTMQEFHLHTMMQDIAASLLMEFEKW
VLQAESSGTLLKTPLDSQATLSSEEVIKAKKRRLARAQKTIGDYCLLAGSPVDANAHYTT
ALELARLTADYFWYAGALEGSVCAILVDQIGQKDTGVEDEVRYRYNNVITHYRKSFIQDN
VQRVSPITFELEATLKLARFLCRRKLIKEVVELLTNAADGAKSLIDANDRLILYVEIARL
FGTLGYQRKAAFFSRQVAQLYLQQENRFAATSAMQVLGMTTKAYRVQSRASITKHSISNE
TEPGNADSGKLHHLLVVSLFESQWSTLQMVVLREILLSAVRAGDPLAAWSAAARLLRSYY
PLITPAGQNGLASALKSAAERLPSGTRCADPALPFIRVYSFPLHPSQMDIVKRNPAREDW
WAGSAPSGPFIYTPFSKGEPTKNGKQDLVWIVGEPVQVFVELANPCGFDLKVDNIYLSVQ
SGNFDAFPLSVDLPTNSSEVIMLSGIPTSVGRVEIPGCTVHCFGVITEHLFRDVDNLLLG
AAQGLVLSDPFRCCGSPRLKNVSVPNISVIPPLPLLVSHVVGGDGAIVLYEGEIRDVWIN
LANAGTIAVEQAHISLSGKNQDSVISIGYEKLKSALPLKPGAEVTIPLTLKAWQLGLGES
DTAAGKGVSGSMGRTVKDGCCPSLLVHYAGSLGDARDLEKNKTSVPPGRRLIVPLQICVL
QGLSFVKARLLSMEIPAYVGESPSNPANVDGNHSNKAVGYGSKIERLVKIDPFRGSWGLR
FLELEMSNPTDMVFEVSVSVLEKPSNEDDVSVDYAAEYGYPKTRIDREYFSRVLIPLEHF
KLPFLDDSFFSKDLQLDESTSCKNSSLSERNTKSELNASIKSLVSRIKVRWQSGQNSCGE
LNITDAIRVALQSSIMDILLPDPLTFSFRLARNVSKNAANLDSPKESSINIQPSMSNSYV
IEHDMTPMEVLVRNNTKETIKMNLSVTCRDVAGQNCVEGTKATVFWAGVLSGITIEVPPL
EESKHSFFLYFLVPGEYTMVAAAVIDDANDVLRARAKCESPDEPIFCRGPPFHVRVIGTA
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgacgtgagcattgagacatcatgcatgatccggatcgccgtccttccaata
ggcaaagtcccccctcctcttctgcgggattaccactccatgctccttccgcaccacacc
atccctctctcaaccatcagctccttctacacggagcaccagaaatcgcctttcgcccac
cagccttgggacacaggctcgctccagttcaaattcttgttgggcgggtctccgcctagc
ccttgggaagatttccagccttatcgcaagttcctctccgtgattggcatttgccactgc
ccttcgtcaccagatcttgatcacgtcatcgatcaattcaatgctgcctgcaaaatttac
acttcggctctagttctacgctgcttcgccttttgtcctggcaattcgcaattggatgat
ggtaagaaaagggagaacttggttttgtttcctcctgcagaccgtacaatgcaggagttt
cacttacatacaatgatgcaagatatcgctgcttcattactgatggaatttgagaagtgg
gttcttcaagcagaatcttcaggaactcttctgaagacgcctttagattctcaagctact
cttagctcagaggaggtgatcaaggctaaaaaacgaagacttgctcgtgcacaaaagaca
ataggggattattgtttgttagcaggatcgcctgttgatgcaaatgctcactatactact
gcactagagctagccaggttgactgcagattacttttggtatgctggggcattggagggt
agtgtttgtgctatactggttgatcaaataggccagaaggatacaggtgtagaggatgag
gttagatatcggtacaataatgtcattacgcattataggaaatccttcattcaagacaat
gttcagagagtttcacccattacctttgaacttgaagctaccttgaaattggccaggttt
ttatgtaggagaaaattgattaaggaggttgtggagttgttaactaatgctgctgatggt
gctaaatctttgatcgatgccaacgacagactcatattatatgttgaaatagctcgctta
tttggtactcttggttatcaacgaaaagctgccttcttctcaaggcaggtagctcagtta
tacctacaacaagaaaatagatttgctgctaccagtgccatgcaggtcctaggaatgacc
accaaagcatatcgtgttcagagcagagcatccatcacaaaacattccatttctaatgaa
actgaaccagggaatgctgatagtggaaaattgcatcatctgttagtagtttcactgttt
gaatcacaatggagcaccttgcagatggttgtgctgcgagagatacttctatctgctgtt
cgtgcaggagatcctcttgctgcctggagtgcagcagcaaggctactaagatcttattat
cctctaattacacctgctggacaaaatggccttgctagtgccttgaaaagtgcagctgaa
aggttgccttcgggaactcgatgtgctgacccagccttacctttcataagggtatactct
tttcctctccatccctcacaaatggacattgtaaaacgcaatccagcaagagaagattgg
tgggctggatctgctccttcaggaccttttatctatacaccatttagcaagggagagcca
accaaaaatggcaagcaagatttggtttggattgttggggaaccagttcaggtctttgtg
gagttagctaacccttgtggatttgatttaaaggttgacaacatctatctctcagtgcaa
tcagggaattttgatgcttttccccttagtgtagatctcccaactaattcatccgaggtg
atcatgttatctggaatcccaacatctgttggacgagtggagattccaggatgcactgtt
cattgttttggtgtaattactgagcacctttttagggatgttgataatttgcttcttgga
gcggcgcaaggacttgtgctttctgaccctttccgatgctgtgggtcgccaaggttgaaa
aatgtgtctgtaccaaatatttctgttatacctccattgccattgttagtgtcgcatgtt
gtaggtggtgatggtgccattgttttatatgaaggtgaaattcgagatgtttggataaat
ctagctaatgctggcacaattgcagttgagcaggcacacatttcactatctggaaaaaac
caagattctgtcatctcgattggatacgaaaaactaaagtctgctcttccattgaaacct
ggtgcagaagtgacgatacctttgaccttgaaagcctggcagcttggcttgggtgagagt
gatactgcagctggtaagggtgtctccggtagtatgggtagaactgtgaaggacggatgt
tgcccctcattgttggtccattacgcagggtcattgggagatgctagggatcttgaaaaa
aacaaaacatctgtgcccccaggaaggcgtctgattgttccactacaaatctgtgttttg
caaggtttgtcttttgtgaaagctcgcttgctttccatggagattcctgcatatgtgggc
gagagtccttccaatccggctaatgtggatggtaaccattcaaataaagctgttggctat
ggaagtaagatagagagattagtgaagattgatccctttagaggaagctggggattacgt
tttcttgaactagagatgtctaatccaactgatatggtgttcgaagtaagtgtttctgtc
ttggaaaaaccaagcaatgaggacgacgtttctgttgactatgctgctgaatatggttat
cccaaaacaagaattgacagagaatacttctcaagggttttaataccacttgagcatttt
aagttaccttttcttgatgattcattcttttcaaaagatctgcagcttgacgagtccacc
agttgtaaaaattctagtttgtcagaaagaaatacaaaatctgaactaaatgcttccatt
aagagcctcgtttccagaataaaagtcaggtggcaatcagggcagaacagctgtggagaa
ctgaatatcacagatgctatacgagtagcccttcaatcatccatcatggatatactattg
ccagatcctctgacttttagctttaggcttgctagaaatgtttctaaaaatgctgcaaat
cttgattcaccaaaagaatctagtattaatattcagccttctatgtcaaacagttatgta
atcgaacatgatatgactcctatggaagttctagttcggaataacacgaaagaaaccatc
aaaatgaatcttagtgttacatgcagagatgtagcaggacagaattgtgttgagggcacg
aaggcaactgtcttctgggccggtgttctaagtggaatcaccatagaggttcctccactt
gaagaaagcaaacatagtttctttctgtacttccttgtcccaggtgagtacaccatggtt
gctgctgctgtaatcgacgatgcaaatgacgttttaagagctagagcaaaatgtgaatcg
cctgacgagcctattttttgtcgaggacctcctttccatgttcgtgtcattgggactgca
tga
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