Gossypium hirsutum (upland cotton): 107963714
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Entry
107963714 CDS
T04793
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107963714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107963714
Spliceosome [BR:
ghi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
107963714
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Pox_G5
Motif
Other DBs
NCBI-GeneID:
107963714
NCBI-ProteinID:
XP_016755646
UniProt:
A0A1U8PWX7
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Position
D06:complement(66346350..66351713)
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AA seq
551 aa
AA seq
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MRRSRKDGDSVDEERDSRRRRIVDSPSSPAEEPLVPYNDDEDDERRVLDHSGGAEEVGRR
VETEEEDDDDDDDDDPYGRGSILDKSNHQVEVRRDCPYLDTVNRQVLDFDFERFCSVSLS
NLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDI
RYVLNPRFSREQVEQLDKNKQWSRALDGSDYLPGMVGLNNIQKTDFVNVTIQSLMRVTPL
RNFFLIPENYQHCRSQLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQ
SEPVEFMSWLLNTLHTDLRISKKSSSIIHKCFQGELEVVKETQNKAISERKEGGGEHNGA
LKIMDGATENNNIGTETYRMPFLMLGLDLPEPPLFKDVMEKNIIPQVPMFNILKKFDGET
VTTTVRPPARMRYRVTRLPQYLIVHMRRFTKNNFFREKNPTLVNFPVKNLELKDYIPLPA
PTKENEKLRSKYDLIANIVHDGKPDEGFYRVFVQRKSEELWYEMQDLHVSETLPQMVALS
EAYMQIYEQQQ
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagcaggaaagatggtgatagcgtagatgaggaacgagactcaagacggcgg
aggattgtggattctccttcttcacctgctgaagaaccgcttgtgccttacaatgatgat
gaagatgatgaaaggagggtattggatcacagtggtggggcagaagaagttggccgacgg
gttgaaactgaagaagaagatgatgatgatgacgatgacgatgatccatatgggagagga
tcaattttagacaaatcaaatcaccaggttgaagtacgaagagactgcccttaccttgat
actgttaaccgccaggtgctagattttgattttgagaggttttgttcggtctctttgtca
aatttgaatgtgtatgcatgtctggtatgtgggaagtattaccaaggaagagggaagaag
tcccatgcttacactcatagtctcgaagcaggacatcatgtctatatcaatcttcgaact
gagaaggtgtattgtctccctgatggatatgaaattaatgacccgtcattagatgatata
cgatatgttctaaacccaaggttttccagagaacaagttgaacaacttgacaagaacaag
caatggtctagagcacttgacggttcagattaccttccaggaatggtgggattgaataat
attcaaaaaactgattttgtcaatgtcaccattcaatctttaatgagagttactcccttg
aggaactttttcctcatccctgaaaattaccagcactgtagatctcagcttgttcatcga
tttggtgagctcacacgaaagatttggcatgctcgaaactttaaaggacaggtgagccct
cacgagtttctacaggccgttatgaaagccagtaaaaaacggtttcgaataggtgtgcag
tctgagccagtagagtttatgtcatggcttcttaatacactgcatacagatcttagaatt
tcaaagaaaagtagcagcatcatccataagtgctttcagggggaactggaggttgtaaaa
gagacgcagaacaaagctattagtgagagaaaagaaggtggtggggaacacaatggagct
ctgaagattatggatggtgcaactgagaataataatattggtaccgaaacttacagaatg
ccttttctgatgcttggattggatttgccagaaccacctcttttcaaagatgtgatggag
aaaaatataatacctcaggttcctatgttcaatatattgaagaagtttgatggtgagact
gtaacgaccactgttcgtcctccagcgaggatgagataccgtgtcaccagattgccacag
tacttgatagttcacatgcgccgctttactaagaataatttcttcagagaaaagaatcca
acattggttaactttcctgtgaaaaacctagagttgaaggactacattcctctgccagca
ccgaccaaagagaatgaaaagttgcggtccaagtatgatctgattgctaatattgttcat
gatggtaagcctgatgaggggttctacagggtcttcgtacagcggaaatcagaagaacta
tggtatgaaatgcaggatctgcatgtttctgaaacacttcctcagatggttgcattgtct
gaagcttacatgcagatatatgaacagcagcagtag
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