Gossypium hirsutum (upland cotton): 107963867
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Entry
107963867 CDS
T04793
Name
(RefSeq) zinc finger CCCH domain-containing protein 24-like
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107963867
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107963867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
zf-CCCH
RRM_1
Methyltransf_4
Methyltransf_15
MTS
Ubie_methyltran
zf-CCCH_2
PCMT
Methyltransf_11
Ish1
Torus
PrmA
Motif
Other DBs
NCBI-GeneID:
107963867
NCBI-ProteinID:
XP_040962961
UniProt:
A0ABM3B7C6
LinkDB
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Position
A03:complement(6608010..6613328)
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AA seq
844 aa
AA seq
DB search
MAASPKNQLSETKTLDSAAQTNGQDSPQPNCESVPPSDPQSTADTNPGEKRKRDDDDPTQ
NSSPHPLWKTTLCSYFRRQDGSCTHGSTCKYAHGEEELRPRLDNTWDPTSERAKKAMKGE
NGEKVAAKEDEEQEVMMTEMVMDGGEDGEACGDPQLSKCLVHLPRKWHADNLRKFLSEQG
ITFKSAKKKKGMVVGFVSFESAEQLKSAVEELEGKSFGNKNLKVANVVPRPFERKVKSAM
AATLSSQQTIDDASIKENAGVPIASNEVQDGATNDDGSALDDSTSKAKCARDAVTPLAHM
PYSDQLEHKKNSVMQMLKKLTRNARKACPNGVSLPQWVLQSRERGGLPCEVEGIIESPVV
NGYRNKCEFSVGYSQQGKPTVGFMLGNFREGVTAVEEPVDCPNVSKIACRYASIFQEFLQ
HSSFPIWNRFKNTGFWRQLAVREGRSAGKVADENFEANISEVMLIVQVCSVGLDEAQVTN
EFERLAQAFAAGAAANSPPLPLNVFVVQDHQGISNVAPTDAPLRSIPIPKTESSLQLETA
NNIIEARIHDCISNLRFSISPTAFFQVNTLAAEKLYSLAGEWAGLGPDTLLFDICCGTGT
IGLTLAHRVGMVIGIEMNASAVQDAYKNAEINGIKNCRFICSKAEDVIGSLLKEYLNVSE
KQGQLSSALESSEKGTLTGEEIDTCATNAHNDGESSCQEPEKCSENDGKEIQNQLQESST
SKDGNSLVPQFKNVVAIVDPPRMGLHPTVVKVLRTHAPLRRLVYISCNPESLVANAIELC
TPSPEKVEKGKKDNRGWRNMSSAGLARHRAKSMPISEPFQPVKAMAVDLFPHTPHCEMVM
LLER
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcaccaaaaaaccaactttctgaaactaaaaccttagactcggccgcccaa
accaacggccaagattcaccccaacctaattgcgaatcagtcccgccgtccgatccccaa
tcaacggccgacaccaaccccggagagaagcgcaagcgggacgacgatgacccgacccag
aattcgtctccccaccctctatggaaaaccaccctttgctcttacttcaggcgtcaagat
gggtcctgcactcatggcagcacgtgcaagtacgcgcacggcgaggaggagctccgacca
cgtctggataacacgtgggacccgacctcagagcgagcgaagaaggcaatgaaaggggag
aatggggagaaggtggcagcgaaggaagacgaggagcaggaggttatgatgacggagatg
gttatggatggcggggaggatggtgaagcgtgtggagaccctcaattgagtaaatgcttg
gtgcatttgccaaggaaatggcatgcggataatttgaggaagtttcttagtgaacaagga
attacttttaaatctgcaaagaaaaagaaaggcatggtggttggttttgtgagttttgaa
agtgcagaacaattgaaaagtgcagttgaggaattggaagggaaatcttttggcaacaaa
aatttgaaagttgcaaacgtcgttcctcgaccattcgagaggaaagtgaaatcggcaatg
gctgcgactctgagctctcaacagactattgatgatgcatcgatcaaggagaatgcaggt
gtccctatcgcttcaaacgaggtacaagatggtgctacaaatgatgatggttctgcactt
gatgattccacctcaaaggcaaaatgtgcacgtgatgcagtcactccccttgctcatatg
ccttatagtgatcaattggagcacaagaagaattctgtcatgcagatgctcaaaaaactt
acgagaaatgcacgtaaagcatgtcctaacggtgtttcacttcctcagtgggttcttcaa
tctagggaaagaggcggtcttccatgtgaagtagaaggtataattgaatcaccagttgta
aatggataccgtaataagtgtgagttttctgttggatattctcaacagggaaaaccaact
gtggggttcatgcttgggaattttagggagggtgtgacagctgttgaagaacctgtggac
tgcccaaatgtttctaaaattgcttgcagatatgcttcaatctttcaggagtttttgcaa
cattcaagcttcccaatttggaacagatttaaaaatacaggattttggcgtcagttagcg
gtccgggaaggaagatcagctgggaaggttgcagatgaaaattttgaggccaatatttca
gaggtcatgctcattgttcaggtttgctcagttgggcttgatgaggcacaagtaaccaat
gagtttgagaggctcgctcaagcatttgcagcaggtgctgccgcaaattctcctcctctg
cctttaaatgtttttgttgttcaggatcatcaaggaatatcaaacgtggcaccaactgat
gctccattgcgttcaatacccatcccgaagacggaaagcagccttcagctagagacagcc
aataacatcatagaagctagaattcatgattgtataagcaaccttcggttttcaatatct
ccaacagcattttttcaggtcaatactcttgctgctgagaaattatactcacttgctggt
gagtgggctggtttgggtcctgataccttactgtttgatatatgctgtgggaccggcacg
attggactcacgttagcgcatcgtgttggtatggttattggcattgaaatgaatgcttct
gcagttcaagatgcgtataagaatgctgagattaatgggataaaaaattgtagattcata
tgttcaaaggctgaggatgtaatagggtctctgttgaaagagtacctcaatgtttctgaa
aaacaaggtcaactttcaagtgccttagaaagtagtgagaaaggaacattaaccggtgaa
gagatagatacatgcgcaaccaatgcacataatgatggagagagctcgtgccaagagcct
gaaaaatgttcagaaaatgatggaaaagagatccaaaatcaacttcaggaaagttccaca
tccaaagatggaaattctttggtgccacaattcaaaaatgttgttgctattgttgatcct
ccacgtatgggacttcatcccactgtggtcaaagttttaagaactcatgctccattacgc
aggcttgtgtatatttcttgcaatcccgaaagcttagtggcaaatgccattgagctctgc
acaccatctcccgagaaagttgagaaagggaagaaagacaaccggggctggaggaacatg
agtagtgccggtttagcacggcacagagccaagtctatgcctatttcagagcctttccaa
cctgtaaaagccatggctgtcgaccttttcccgcatactccacactgtgaaatggtaatg
ctcttggagcgatag
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