Gossypium hirsutum (upland cotton): 121202840
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Entry
121202840 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase UPL7-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121202840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
121202840
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121202840
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
HECT type E3
121202840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
121202840
NCBI-ProteinID:
XP_040970933
LinkDB
All DBs
Position
A01:117528036..117536814
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AA seq
1164 aa
AA seq
DB search
MEEPRKQQVSLRGASASEISRDALLEKVSQEREHRNYARKAASASIFIQKVWRSYGETRK
VAMRFQEEWESLVKYQAGIMTGELISSSVLRPFIFFITRLSIRQRKNLARELKCMQTCFG
ILLESINSTDSRKNICSLIVGTTEQRRTSMYQMRKLISLCSFILSECDTSHAGSQDIVVL
TSLALRFVVVLTDLKSWKIVNDENIGDADAAVKNFVRFIGSCRSGLYASLRRYISRLDAF
SSAKVKSIVQTDDKFLISASAITIAIRPFSLTTFNAADCIKFDVHSAAEQYCLYLLTIPW
LTQRVPAVLLPALKHKSTLLPCLQLLLTSKDKIVRMMSDIDQFSMDCSLNAVPPIGWALV
NIIGLAAGSENDFTHSGALNQGLEYATYVHVLTILADNLLSWLHDAGWNEKGNQNLEGND
GAYEPPVSMQENKTTCGSLKTSFIDLFRPVCQQWHLKKLLEKSKTYAYTDESKTKILPPN
NLESLENLRLLDIAYFYSYMLRIFAAFNPMIGPLPILNMLSFTPGFLGNIWGVLESSIFL
GNSHTIGDANYARSKVSGKKKGVDKKLKQASNDGVSKWANVLQKLTGKSQVEVDFSDPAD
NHQVDEDASDVWDVEPLRRGPQGISKDMSCLLHLFCATYSHLLLVLDDIEFYEKQVPFTL
EQQQRIASMLNTLVYNGLSSSVGQQNASLMDSAIRCLHLIYERDCRHQFCPPALWLSPAR
RSRPPIAVAARTHEVVSANIRSEDAVVVHSTGSVITSMPHVFPFQERVQMFREFISMDKV
SRRMAGEVAGPGSRSIEIVIRRGHVIEDGFRQLNSLGSRLKSSIHVSFVSECGLPEAGLD
YGGLSKEFLTDISKAAFAPEYGLFSQTSTSDRLLIPNAAARFLENGIQMIEFLGRVVGKA
LYEGILLDYSFSHVFVQKLLGRYSFLDELSTLDPELYRNLIYVKHYEGNVEDLCLDFTVT
EESFGKRHVIELKPGGKDVCVTNANKMQYVHAMAFYKLNRQMLPFSNAFYRGLTDLISPS
WLKLFNASEFNQLLSGGDHDIDVDDLKHNTRYTGGYSEGSRTVKLFWEVMNVFEPKERCM
LLKFVTSCSRAPLLGFKYLQPAFTIHKVASDAPLWAAIGGSDVERLPSASTCYNTLKLPT
YKRSSTLKAKLRYAINSNAGFELS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacctcgaaaacaacaggtatcgctgagaggagcaagcgcaagtgaaatatca
agagatgcgctgcttgagaaagtttctcaagaaagagagcatcgcaattatgcaagaaaa
gctgcctctgcttcaatctttatccagaaagtttggagaagctatggtgagacaaggaaa
gtggctatgagatttcaagaagaatgggaaagtttggtgaagtatcaagctggaattatg
actggggaattgatttccagcagtgttttgaggccttttattttcttcattacacgttta
tccattcgacaacgaaagaatcttgccagagaattaaaatgtatgcagacttgctttggg
attctcttggaaagcataaattcaactgattcaaggaagaatatttgctccctgattgtt
ggcacgactgaacagagaagaacatccatgtaccaaatgcgaaagctgatttcactctgc
tcattcattctctctgagtgtgatacgtctcatgcaggaagtcaagatattgttgttctg
acatctcttgcattgcgttttgttgttgtcttaactgatctgaaaagttggaagattgtt
aatgatgagaatattggggatgcagatgctgcagtgaagaactttgttagatttattggt
agttgtagaagtggtctttatgcatctctgagaagatatataagcagattggatgctttt
tcttctgctaaagtgaaaagtattgtccaaactgatgacaaattcttgatcagcgcaagt
gcaattactatagctattcgcccatttagtctgacaacctttaacgcagctgattgtatt
aagtttgatgtgcattctgctgctgagcagtactgtttgtacttactcacaattccttgg
cttactcaacgtgtaccagctgttcttctacctgctctaaagcacaagtctactctttta
ccatgtttgcaacttttactgacttcaaaagataaaattgtcagaatgatgtcagacatt
gatcagtttagcatggactgttctctgaatgcagttccaccaattggttgggctcttgtg
aacattataggcctagctgctgggagtgagaatgactttacgcattctggagccttaaat
caaggtctcgaatatgcaacctatgtccatgttctaaccattcttgcagacaacttattg
tcatggcttcatgatgctgggtggaacgaaaaggggaatcagaatcttgaaggcaatgat
ggagcttatgaaccacctgtcagtatgcaggagaacaagacaacatgtgggtccttaaag
acatcctttattgacctatttagacctgtttgtcagcaatggcatcttaaaaagcttttg
gaaaaatcaaaaacatatgcttatacagatgagagtaagaccaagatcctacctccaaac
aacttagaatctctggagaacttgagattgcttgatattgcatatttttactcatacatg
cttaggatatttgcggcattcaatcccatgattggaccgttgcctattctcaatatgcta
tctttcactcctggatttcttggcaacatttggggagtgctagaaagttccattttccta
ggaaatagtcacaccattggagatgctaattatgccagaagcaaagtttcagggaagaaa
aaaggagttgataaaaaactaaaacaggccagtaatgatggagtcagtaaatgggctaat
gtattgcagaagttaactggcaaatcacaagtagaggttgatttttcagatccagctgat
aatcatcaggttgatgaggatgcttctgatgtttgggacgtagagcctttgaggcgtggt
cctcaaggtatttcaaaagatatgtcatgtctgcttcatctgttctgtgccacttattct
catctgctgttagttcttgatgacatagagttttatgagaaacaggttccattcacactg
gagcaacaacaaagaattgcttcaatgctcaatacactggtctataatggcctgtcttct
agcgtgggccaacaaaatgcttcccttatggattctgccatcagatgcttgcatctaata
tatgaaagggattgcaggcaccagttctgcccccctgctttgtggctttcaccggctaga
aggagccgacctcccattgcagtagctgctagaactcatgaagttgtatcagctaatatc
agatcagaggatgctgtagttgttcacagcacgggttctgtaatcaccagcatgccacat
gtatttccatttcaagaaagggttcaaatgtttagggagtttatcagcatggataaagtc
tctcggagaatggctggtgaagtagctggacctggttcccgatcaattgagatagtaatt
cgtcgaggtcatgtcattgaagatggctttcgacaattaaattcacttggctcaaggttg
aagtcatcaattcatgtttcttttgttagtgaatgtggcctcccagaggctggtctggat
tatggtggattatctaaagaatttttaactgatatatctaaagcagcttttgctcctgag
tatggattattttcccaaacatcaacttcagacagacttctaatacctaatgcagctgca
agatttctagagaatggtattcagatgattgagttccttggaagggttgttggtaaagca
ctttatgaaggaatcttactagattactctttttcacatgtttttgtgcaaaagctgtta
ggccgatatagctttcttgatgaactgtcaacacttgatcctgagctctaccggaacctt
atttatgtcaagcactatgaaggtaatgtcgaggatctctgtctagacttcacagttact
gaggaatcttttggtaaacggcatgttattgagcttaaacctggtggcaaggatgtttgt
gtgactaatgcgaataagatgcagtatgttcatgcaatggcattttacaaactcaaccga
cagatgcttcccttttcaaatgcattttatagggggttaactgatcttatatctccatct
tggttgaagttatttaatgcaagtgaatttaatcagttgctttctggtggagaccatgat
attgatgttgatgacttaaaacataatacacggtatactggtggctattctgagggaagt
cgaactgttaaacttttctgggaggttatgaatgtttttgagcccaaagaacgttgtatg
ctgctaaaatttgtgaccagctgttcgcgagctcctttactggggttcaaatacttgcag
ccggctttcacaattcataaggttgcaagtgatgctcctctttgggctgcaatcggaggt
tcagatgtggagcgacttccatcagcttctacatgctataacactctcaagcttccaaca
tacaagcggtcaagtactctgaaagcaaagcttcgttatgcaattaattctaatgctgga
tttgaactttcttaa
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integrated database retrieval system
