Gossypium hirsutum (upland cotton): 121202937
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Entry
121202937 CDS
T04793
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic isoform X1
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00730
Thiamine metabolism
ghi01100
Metabolic pathways
ghi01240
Biosynthesis of cofactors
Module
ghi_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
121202937
Enzymes [BR:
ghi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
121202937
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Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
121202937
NCBI-ProteinID:
XP_016740499
UniProt:
A0A1U8NRA8
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Position
D03:complement(45386654..45390939)
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AA seq
649 aa
AA seq
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MASVHASFTSVVCKNGNHSAPSRFPCTTFLPGFDVVGRVSNACKKEICPSMSSGPKATLT
FDPPTTNSEKSKQKKHTINPASPDFMPLPSFEECFPKSSKECREVIHEESGHVLKVPFRR
VHLTGDVPNFDTYDTSGPQNINPRIGLPKLRKGWVDRREKLGAPRYTQMYYAKQGIITEE
MLYCATREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASS
IEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIAE
DLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHK
ENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDV
QVMNEGPGHIPMHKIPENMQKQFEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGAL
GTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPHAQAWDDTLSKARFEFR
WMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGN
PEEAMQHGMDAMSAEFLAAKKTVSGEQHGEVGGEIYLPASYVNSSDRLT
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtgcatgctagcttcacatcagttgtatgcaagaatggcaaccattctgct
ccttcaaggtttccttgtacgaccttcttacctggctttgatgtggttggtcgtgtttca
aatgcttgtaagaaggaaatatgcccttctatgagctcaggtcctaaagccacattaact
tttgatcctccaacaaccaattcagagaaaagcaaacagaagaagcataccataaatcct
gcttcccctgactttatgccacttccatcatttgaagaatgtttcccaaagagctcaaaa
gaatgcagggaagttattcatgaagaatctggccatgtactcaaggttccctttcgaagg
gttcatttgactggagatgtgccaaacttcgacacatatgacaccagtggtcctcaaaac
atcaatccacgcattggactccctaaattgcgcaagggctgggttgacagacgggaaaaa
ctgggtgcacctagatacactcagatgtactatgctaagcagggaatcattactgaggaa
atgttatactgtgctactcgtgagaagcttgacccagaatttgttaggtcagaggttgcc
cgtgggagggcgatcattccttccaacaaaaagcacttagagctggaaccaatgatagtt
ggacgaaactttttggtcaaagtaaatgcaaatattggaaactcagccgttgcaagttca
attgaggaggaagtttacaaggtccaatgggcaacaatgtggggtgctgatactgttatg
gatctctcaactgggcgccacattcatgaaacccgtgaatggatcctacgtaactctgct
gtgcctgttgggaccgtgccaatctatcaagcacttgaaaaagtcaatgggattgctgaa
gatcttagttgggaagtcttcagggacaccctgattgagcaagctgagcagggtgtagat
tacttcacaatccatgctggggtactgctgcggtacattcccttaacagcaaaacgcatg
acaggaatagtttctcgaggaggatctattcatgcaaaatggtgcctggcgtaccataag
gagaattttgcttatgagcattgggatgacatacttgatatctgcaaccaatatgatgtg
gcgctttcaatcggggatggactaagacctggatccatatatgatgccaatgacactgca
cagtttgctgagcttttaacccaaggggaactgactcgtagggcttgggaaaaggacgta
caggtaatgaatgaaggacctggacacatcccaatgcacaagattccagaaaatatgcaa
aagcagtttgagtggtgcaatgaagcacctttctatacccttggtcctttgacaactgat
attgctcctggatacgatcatattacttctgcaattggtgcagccaatattggggctctt
ggcacagcacttctgtgttatgtaactccaaaggagcaccttgggttgccaaacagagat
gatgtaaaggctggtgtaatagcctataagatagctgcccatgctgctgatttagccaag
ggtcatccacatgctcaggcatgggatgatacattaagcaaggctagatttgagttccga
tggatggaccagtttgctttgtcactggaccccatgactgccatgtccttccatgacgaa
accctgccatccgaaggtgccaaagtggctcacttttgctccatgtgtggaccgaagttt
tgctcaatgaagataacagaggatgttcgaaagtacgctgaggagcatggttacgggaac
cccgaggaagctatgcaacatgggatggatgctatgagtgctgaattcctggctgctaag
aaaacagttagcggtgaacaacatggtgaagttggtggggaaatctacctgcccgccagt
tatgtgaactcttctgacaggcttacatga
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