Gossypium hirsutum (upland cotton): 121202958
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Entry
121202958 CDS
T04793
Name
(RefSeq) actin-related protein 5-like isoform X1
KO
K11672
actin-related protein 5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121202958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
121202958
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
121202958
INO80 complex (yeast)
121202958
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Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
121202958
NCBI-ProteinID:
XP_040934107
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Position
A10:complement(114672694..114676944)
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AA seq
724 aa
AA seq
DB search
MPFISKIQRQTDYNRFPPSTPIVIDNGASYFRIGWAGETGPRVIFRNIVQRPRHKFTGET
VTIVGDHDPALLKYFDCTRSSPRSAFDSNVVFQFEIMEYVLDFAFDRLGANGSRIDHPIL
ITECVCNPVHSRSKMAELLFETYGVRSVAFGVDAVFSYKYNQLHGICEKDGLAICPGFTT
THVIPFVDGEPVYKGCCRTNIGGYHITDYLKQLLSLKYPHHMARFTWEKVEDLKMEHCYI
APDYALEAQLFQKGGKEAEYKTRCWQLPWVPLPTDEPPSEAEIARKAAIRERQGQRLREM
AEAKRSSRINELENQLQGLEFLLQQLGQVQEEDIQSFLSETGYASKQEIELTLTKVTQSL
RKAKGEPKPEQAENEEKADSCTSDKYPLINVPDNMLTPEQLKEKKRQIFLKITTEGRQRA
KQKRVEEELERERKTQQDEERRLENPQLYLEQMHTKYKELYEKVEQRKRLKTNGGHTNGS
SSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMGKDNDDDDDGA
DEDEAELARVSSRLQEIDPTFVPKPEPTASQPATTEVPHVRPLTKEDFQIVLGVERFRCP
EILFHPNLVGIDQVGLDEMTGVSIRRLPSKDKALANRLTSSVFMTGGCSLFPGINERLEA
GIRMLQPCGSPIKVVRALDPVLDAWRGASLYAANSRFHQQTFSRSDYYEKGEDWLRQYQV
RYTL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccattcatatcaaaaattcaaaggcaaacagattacaatcgctttcctccatcgact
cccattgttatcgacaatggggcttcctattttcgtattggttgggcaggagagactggg
ccacgggttattttccgtaacattgttcaaagacctcgccataaattcaccggggaaact
gtgacaattgttggtgaccatgatcccgctttactgaaatactttgattgcactcgttcc
agcccccgatccgctttcgatagcaatgttgtttttcagtttgaaatcatggaatatgtt
ctcgactttgcatttgatcggttgggtgcaaatggatcacggattgatcatcctatcctg
atcacagaatgtgtgtgcaacccagttcattcccgcagtaaaatggcagaacttcttttc
gagacttatggggttcgatctgtagcctttggtgttgatgctgttttcagctacaagtat
aatcaactgcatgggatttgtgagaaagatggtctagctatctgcccgggattcaccaca
actcatgtcattccttttgttgatggggagcccgtttacaaaggatgctgtcggactaac
attggcggttaccatatcactgactatttgaagcaacttctttcacttaaatatcctcat
cacatggctagattcacatgggaaaaggttgaagatctgaagatggaacactgctatatt
gcacccgattatgccttagaagctcaattatttcagaaaggcggcaaggaagcagaatat
aaaaccaggtgttggcagctcccgtgggttccactgcctaccgatgaacctccttctgaa
gcagaaatagcacgaaaggctgctataagggaaaggcaaggacaaagattaagagaaatg
gccgaagcgaagaggtcttctagaataaacgaactagaaaatcaattgcagggattggaa
tttcttttgcaacaacttggacaagttcaagaggaagatattcagtctttcctttcggaa
actggttatgcttctaaacaggaaatagaattgactctcacaaaagtgacacagtcatta
cgaaaagcaaaaggtgaaccaaagcctgaacaagctgaaaacgaggagaaggcagattct
tgtacaagcgataaatatccgcttatcaatgttcctgataatatgctgacccccgagcag
ctcaaggaaaagaagaggcagatttttcttaaaatcacgacggaaggcaggcagcgagct
aaacagaaacgtgtcgaagaagaattagaacgagaaaggaaaacccagcaagatgaagaa
agacgcttggagaaccctcaactttatctcgaacaaatgcatactaaatacaaagaactg
tacgagaaggttgaacagcggaaaagactaaagacaaatggcggacatactaatggtagt
agttctgggggcgtagggcgtggggaaagattgaatgctgctcagagggaaagaatgcgc
cttttaactactgccgcctttgatcgagggaaaggcgaggatacttttggtgccaaagat
gaagattggcaactttacaaactaatgggaaaagataatgatgacgatgatgatggagct
gatgaagatgaggcagagctggcccgtgttagttctaggctccaggagatagacccaaca
tttgttcctaaacctgaaccgacagcttcacagccagctaccactgaggtaccccatgtt
cgtccgctcactaaggaagatttccaaattgtgctcggggttgaaaggtttcggtgtcct
gaaatattattccacccgaacttggttggtatagatcaagtgggtttagacgaaatgacg
ggggtctcgatcagaaggttgccatcgaaggacaaggcactagcgaacaggttgaccagt
tcggtctttatgaccggagggtgcagtctctttcccggcataaatgaacgtttggaagct
ggaatccggatgcttcaaccatgtggatcgccaattaaggtggtacgagcattagatccg
gttcttgatgcatggcgtggcgcttccctgtatgctgcaaactcaaggttccatcagcaa
acgttcagtaggtcagattattacgagaagggagaggactggcttcgccaatatcaagtg
cgatacacattgtaa
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