Gossypium hirsutum (upland cotton): 121202968
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Entry
121202968 CDS
T04793
Name
(RefSeq) phytochrome E-like isoform X1
KO
K12123
phytochrome E
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121202968
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
PAS_4
HATPase_c
HisKA
PAS_9
PAS_3
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-GeneID:
121202968
NCBI-ProteinID:
XP_040935523
UniProt:
A0ABM2YYE1
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Position
A10:complement(3525028..3529544)
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AA seq
1127 aa
AA seq
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MEAESGERGKQPKRERPVAALSSSAASNMKSMDKGKLIAQYNADAGLMAEFEQSGVSGKS
FNYSKSVLYAPHSVPEEQITAYLSRIQRGGLVQPFGCMIAVEETSFRIIGYSENCFGLLG
LDLDSEDEIKGVKGLIGIDVKSLFTPASGASLAKAAASREISLLNPIWVYSRSTQKPFYA
ILHRIDVGIVIDLEPARLGDPALSLAGAVHSQKLAVRAIARLQSLPGGDIGVLCDTVVED
VQKLTGYDRVMVYKFHDDGHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRM
ICDCHANPVKVIQSDELKQHLCLVNSTLRSPHGCHTQYMANMGSIASLVMAVVINGNDST
KLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLIEKKILRTQTLLCDM
LLRDAPLGIVTQSPNIMDLVKCDGAALHYRGKCWLLGVTPTESQVKDITQWLLTTHEDST
GLSTDSLADAGYPGAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKD
DSGRMHPRSSFNAFLEVVKSRSLPWEIPEINAIHSIQLIMRDSFRDMEESGSKELACGQQ
NDTETEGINEISSVAYEMVRLIETGTAPVFGVDTAGIINGWNAKVAELTGLQADHAIGKS
LADEVVHEDSQEVYKNLIGRALQGEEDKNVELKLRNFEPHRKNAVVYIVVNACTSRDLAN
DIIGVCFVGQDITSEKVVLDKFIRLQGDYRAIIQSLSPLIPPIFASDENICCSEWNAAME
KLTGYSRNEVIGKILAGEIFGGLCQLKGQDSMTRFMIMLYQGISGRDAEKFPFSFFDRKG
KFVEVYIVANRRTAADGNIIGCFCFLQVIVPAMQEATEEHKQEDKELFTKLKHLVYMRQE
MKNPLNGIRFTHKLLETTAISENQKQFLETSDACERQITAIIEDIDFRSDDEGSMELSME
EFVLGNVLDAVVSQVMILLKERNLQLFHETPKEIKALSLYGDRIRLQLVLSDFLLNMVHH
APSPDGWVEIKISPGLKLLRDGNEFLRLQFRMTHPGKGLPSTLIQEMLESGNSWTTQEGL
GLNMSRKLLNRMNGHVQYVREHNKCYFLIDLEIKTKGRQKASLLEQH
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgagagtggagaaagaggaaaacaacccaaaagagaaagacccgttgctgct
ttgtcatcatcagctgcgagtaatatgaaatctatggataaagggaaactcattgctcaa
tacaatgcggatgctgggcttatggctgagtttgagcagtctggtgtgtcgggtaagtcc
tttaactattcaaaatcggttctttatgctccacatagtgtgcctgaagaacaaataact
gcttatctgtcgagaatccaaaggggtggtttggttcaaccttttggttgtatgattgct
gttgaagaaaccagttttaggatcattggttatagtgagaattgttttgggttgttgggt
ttggatttggatagtgaggatgagattaaaggggtgaagggtttgattgggattgatgtg
aaaagccttttcacgcctgcatcaggtgcttctttggcaaaagctgccgcatctagagag
atttcattgttaaacccgatttgggtttattcaaggagcactcaaaagccattttatgct
attttgcatagaattgatgtggggattgtgattgatttagagcctgctcggttaggtgat
ccggcattgtcgcttgctggtgctgtgcactcacagaaactcgctgttcgggcgattgct
aggttgcagtcgcttcctggtggtgatatcggagtattgtgtgatacggttgtggaggat
gttcagaagcttactggctatgacagggttatggtgtataagttccatgatgatggtcat
ggtgaagttgtgtcagaaatcaggaggtctgatttagagccttatttgggtttgcattac
cctgctacagatatccctcaagctgctcgtttcttgttcaagcagaatcgcgttaggatg
atctgtgactgccatgcaaatccggttaaggtcattcaaagtgatgagctgaaacagcat
ctctgcttggtcaattcaacccttaggtcaccccatggttgtcacacacagtacatggca
aatatgggctcgattgcctcgttagtgatggcagtcgttataaatggtaatgattcaaca
aagctttggggactggttgtctgtcatcatacttcgccgcgctatgtgccattccccctt
cgttatgcctgtgaatttctcatgcaggcatttggactgcagctatacatggaacttcaa
ttagcatcacaattaattgagaagaagattctaaggactcaaaccttactttgtgatatg
cttctccgtgatgccccgttgggtattgtgacacaatcccctaatatcatggaccttgta
aagtgtgatggggctgcacttcactacagagggaaatgttggttgctgggtgttactcca
actgagtcgcaggtaaaagatataactcagtggctgctcaccactcatgaggattccact
ggactgagcaccgatagtttggctgatgctggctatcctggtgctgctttactgggtgat
gcagtttgcggtatggctactgcccgaatcacttcaaaggatttcttgttctggttcagg
tctcatactgcaaaggaagtgaaatggggaggagccaagcatcacccggaggacaaggat
gatagtggaagaatgcatccgagatcatcctttaatgcttttcttgaagtggtgaaaagt
agaagtttgccttgggagattccagaaattaatgctattcactctatacagctaataatg
agagattcatttcgagacatggaagagagtggctccaaggagttagcttgtggccagcaa
aatgatactgagacggagggaatcaatgaaatcagctcagtggcatatgaaatggttaga
ttgattgagactggaacagctccagtctttggagttgatacagccggtatcataaatggt
tggaatgcaaaagttgcagaattgacaggtttacaagccgatcatgcaatcgggaaatcc
ctagctgatgaagttgttcacgaagattctcaagaagtgtacaaaaatctcataggaaga
gctttgcaaggtgaggaagacaagaatgttgagttaaaactcagaaatttcgagcctcat
cggaaaaatgcagtagtttatatcgtggtcaatgcctgcacaagcagggatttagcaaat
gatatcattggtgtatgctttgtgggtcaagatatcacatctgagaaagtcgtgctggat
aagttcatccgtttgcaaggagattatagggctatcatacaaagtcttagccctttgatc
cctccgatatttgcttctgatgagaatatttgctgttctgaatggaatgcagccatggaa
aaactgactggctacagcagaaatgaggtcataggtaaaatactagctggagaaatcttt
ggaggtttatgtcagctcaaaggccaggactcaatgactcgatttatgatcatgttgtat
caaggaattagtggtcgggatgctgagaagtttcccttcagctttttcgatagaaaaggg
aaatttgtggaggtttacatagtggcaaacaggcggactgctgctgatgggaacataatt
ggttgcttctgcttcttacaggttattgtgcctgccatgcaagaagctactgaagaacac
aagcaagaagacaaagagttgtttacgaaacttaagcacttagtttacatgcgacaagag
atgaaaaatcctttgaatggtattagatttacccacaaacttttagaaactacagccatt
tctgaaaatcagaagcaattccttgagactagtgatgcttgtgaaagacagatcacggca
ataattgaggatattgactttcgaagcgatgatgaaggcagcatggagctgagcatggaa
gaatttgttctagggaacgttctcgatgctgtcgtcagtcaagtcatgattttgcttaaa
gaaaggaacttacaactctttcatgaaactccgaaggaaatcaaggcactatctttatac
ggtgatcgaattaggctccagctagtcctatcggatttcttgcttaacatggtgcatcat
gctccttctccagatggatgggtagaaatcaagatttcacctggtctaaagctactacga
gatggtaacgagtttctccgattacaattcaggatgactcacccaggtaaaggccttcct
tccactcttattcaagaaatgctcgagagtggaaatagttggacaacgcaggaaggacta
gggctaaacatgtcgcggaagcttctaaacaggatgaatggacatgttcagtatgtcagg
gaacataacaaatgttacttcctcattgatctggaaatcaaaacgaaaggaagacaaaaa
gcatcactactagaacaacactaa
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