Gossypium hirsutum (upland cotton): 121203024
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Entry
121203024 CDS
T04793
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121203024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
121203024
Spliceosome [BR:
ghi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121203024
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
121203024
NCBI-ProteinID:
XP_040955789
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All DBs
Position
A03:complement(99441342..99444892)
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AA seq
496 aa
AA seq
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MLSVLLLGCNFQATLADSFLADLDELSDNEADVLEEENNDVANMEEDIDGDLADIETLNY
DDLDSVSKLQKSQRYIDIMQKVEDALEKGSHISNQGMVLEDDPEYQLIVDCNGLSVDIEN
EIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVV
SVTASTTSGKPLPEDVLQKTVDACDRALALDTAKKKVLEFVESRMGYIAPNLSTIVGSAV
AAKLMGTAGGLSALAKMPACNVQLLGAKKKTLAGFSTATSQFRVGYIEQTEIFQTTPPAL
RSRACRLLASKATLAARIDSTRGDPLGNAGKTLKEEIHKKIEKWQEPPPAKQPKPLPVPD
SEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKL
RVSIGQSKLAAKVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQ
STYFSETGTFSKIKRT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgttcttttacttggttgtaattttcaggcaactttagctgattcattcctt
gcggaccttgatgaattatcagacaacgaagccgatgttctggaggaagaaaataatgat
gtcgcaaacatggaagaagatattgatggtgacctcgcggatatcgaaacgcttaactac
gatgatctggacagtgtttccaaattgcaaaaaagtcagagatacattgatattatgcag
aaagtggaagatgcgctcgagaagggttctcatatatcaaatcagggcatggtactggaa
gatgatcctgagtatcagctgattgtggactgtaatggactatcagttgatatcgagaat
gagattgttattatccataattttatacgtgataagtaccgattgaagtttcctgagctt
gaatcgcttgtgcatcatccaattgattatgctcgtgtggtgaaaaagattggcaatgag
atggatttaacccttgtggatttggaagggcttttgccttcagctatcattatggttgtt
tcagttacagcatcaactaccagtggcaagccacttcctgaagatgttctccagaaaact
gttgatgcgtgtgatcgtgctctggctctggatactgcaaagaagaaggttcttgagttt
gtagaaagtagaatgggatatattgcaccaaatctttctactattgttggaagtgctgtt
gctgctaaacttatgggtactgctggcggtctttcagcattagctaagatgcctgcttgt
aatgttcagctgcttggtgcgaagaaaaagacccttgcagggttttccactgcaacgtca
cagtttcgtgttgggtatattgaacagacagagatttttcaaactacaccccctgctttg
aggagtcgtgcttgtcgtctcttggcttctaaagcaactcttgcagcacgtatagactct
actagaggggatcctttagggaatgctggaaaaaccttaaaggaagaaattcataagaaa
attgaaaaatggcaagaaccacctcctgcaaagcagcctaaaccacttcctgttcctgat
tctgaacctaagaaaaagaggggtggtcgtcgcttaaggaagatgaaagaaaggtatgct
ataacagatatgaggaagctagcgaacaggatgcaatttggagtacctgaggaaagctct
ttaggtgatggactaggtgaaggttatggaatgcttggtcaggctgggagtggcaaactg
cgtgtttcaattggtcagagcaaacttgcagccaaagttgctaagaagttcaaggaaaag
aattacggaagcagtggtgccacctctgggctgacttcaagtttggcattcacacctgtg
caggggattgagctcacaaatcctcaagctcatgcacatcagcttggcagtggaactcaa
agtacttacttctcagagacaggaacattttcaaagatcaagaggacatag
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