Gossypium hirsutum (upland cotton): 121203109
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Entry
121203109 CDS
T04793
Name
(RefSeq) scarecrow-like protein 30
KO
K27753
GRAS family protein LISCL
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
121203109
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Other transcription factors
GRAS
121203109
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GRAS
DUF2642
Motif
Other DBs
NCBI-GeneID:
121203109
NCBI-ProteinID:
XP_040971994
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All DBs
Position
A06:121378356..121381883
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AA seq
720 aa
AA seq
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MDPSLQGLYSSVDRFRVNDETLLAISSPNFNNGFKNETFAGIPPLQPAMIPINLLPSASV
NEPEDYDFSDVVLKYISEMLMEEDMEDKTCMFKESSAALQAAEKSFYEVLGEQYPPSLEP
ELKYQNHESSNELRGQSCCSCSSGDGNLLNLPCNYDLGVQMSLNYSSQANSSHSSGNSAG
SLVDGFTDSPVSTPRLPEIFGDSESVIQFRKGFEEASRFLPNRGNLFVDVESDGLFLKEV
KEEAKSVVEKVENELLQDRPRGKKKPYPEDVNLYNGRSNKQSSVYTESTVSPEMFDTVLL
NCQSLADLQKVLQHETNKNVQQNGQSKGPTGGKARAKKGKWNVVDLRTLLTLCAQAVATD
DRRSANELLKQIRQHSSPMGDGMQRLAHYFVDGLEARLAGSGTQSYNPVFTRPTSAANVL
KAYHLFLAACPFRKLSDFFSNTTIMNLAENAARLHIIDFGILYGFQWPCLIRRLSTRPGG
PPKLKITGIDLPQPGFRPAERVEETGRRLANYAETFKVPFEFHAIAQKWDTIQIEDIKIE
SGEVLIVNCIYRLRNLLDETVVVESPRNKVLNLMRKLHPDVLILGIVNGAYSAPFFITRF
REALFHYSTLFDMLETNVPREIPERMLIEREIFGWEAMNVIACEGAERIERPETYKQWQV
RTTRAGFRQLPLDKEMMKTAKERVNTSYHKDFVIDEDNHWLLQGWKGRIVYAHSCWVPAS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggatccgtcgttgcaggggctttacagttctgttgatagattcagagtaaatgatgaa
actttgttagcaatatcgagcccgaactttaataacgggtttaagaatgaaacttttgct
ggtattcctcctttgcaacctgctatgattccgataaatttgctgccttctgcaagtgtg
aacgagcccgaggattatgactttagtgacgtagtgcttaagtacataagtgagatgtta
atggaggaagatatggaagataagacctgcatgtttaaagagtcttcggcagcccttcaa
gctgccgagaaatcattttatgaggttcttggagaacagtatccaccttctctggaaccc
gaattgaaatatcaaaaccatgaaagctcaaatgaacttcgtggtcaaagttgttgcagt
tgtagtagtggtgacggtaacttactcaatcttccatgcaactatgatttaggcgtgcaa
atgtctttaaactacagttctcaggccaattcatcccatagttccgggaacagtgctggt
agtctcgtagacggctttacagattctccggtgagtactccccggcttcctgaaatattt
ggtgatagtgagtcagtcattcaattcagaaaagggttcgaggaagcaagtaggttcctt
ccgaatcgcggaaacttgtttgtcgatgtagagagtgacggactgtttctcaaagaggtg
aaggaagaggctaaaagtgtggtagagaaggtggaaaatgagttattgcaagacagaccg
aggggaaagaagaagccttatcccgaggatgtgaatttatacaacggcaggagtaacaag
cagtcgtcggtttatactgaatccactgtaagcccggaaatgtttgatacagtgttactg
aattgtcaaagcttagccgaccttcaaaaagttttgcaacacgaaacaaacaagaatgtg
cagcagaacggacagtcaaaaggtcctacaggtgggaaggcacgtgcaaagaaaggtaaa
tggaatgtggtggatttgaggactctgttgactctttgtgcacaagctgttgcgaccgat
gatcggaggagtgcaaatgagctgctgaagcaaatcaggcagcattcttcgcctatgggt
gatgggatgcaacggttggcccactattttgtcgatggtctagaggcacgcttagctggc
tccgggacccagagttacaatcctgttttcacgagaccgacatcagctgctaacgtcttg
aaagcttaccatctgtttcttgctgcatgcccttttaggaagctctcggatttcttctct
aatacgacgataatgaatcttgcagaaaatgcagctaggcttcacattattgacttcggt
attctatatggcttccaatggccttgtcttatacggcgtctctcaactagaccaggggga
ccacctaaactaaagatcacagggattgatcttccgcaacctggtttccggccagcagaa
agggttgaggagacagggcgtcgtcttgcaaactatgctgagactttcaaagttccattc
gagttccatgcaattgcacaaaaatgggacaccattcagatcgaggacataaagattgaa
agtggtgaagtgcttattgtaaactgcatttacaggcttcggaatctgctcgatgagact
gtggttgtggagagtccaaggaataaagttctgaacttgatgaggaaattgcatcccgat
gttctcatactagggattgtgaacggtgcctacagtgctccattctttattacgagattc
agggaggctctcttccattattccactttattcgatatgcttgagacaaatgtgccccgt
gaaattccggaacggatgctaatcgagagagagatatttggttgggaggctatgaatgtc
attgcatgcgaaggtgctgaaagaattgagaggcccgagacatacaagcaatggcaggtc
cggactacaagggccgggttcagacagttgccactggataaggagatgatgaagacggca
aaggagagagtcaatacaagctaccacaaggactttgtaatcgacgaggataaccattgg
ttgcttcaagggtggaagggacggattgtttatgcacactcgtgttgggtgcctgcctcg
taa
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