Gossypium hirsutum (upland cotton): 121203428
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Entry
121203428 CDS
T04793
Name
(RefSeq) small RNA 2'-O-methyltransferase-like isoform X1
KO
K20798
small RNA 2'-O-methyltransferase [EC:
2.1.1.386
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
121203428
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.386 small RNA 2'-O-methyltransferase
121203428
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121203428
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsRBD2
Hen1_Lam_C
Hen1_LCD
DSRM_2
Methyltransf_12
Methyltransf_23
Methyltransf_11
Methyltransf_25
dsrm
Methyltransf_31
FKBP_C
Methyltransf_33
MTS
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
121203428
NCBI-ProteinID:
XP_040951230
UniProt:
A0ABM3A8P7
LinkDB
All DBs
Position
D06:41167087..41178786
Genome browser
AA seq
971 aa
AA seq
DB search
METGGSLVQAIRKPTLTPKAIIHQKFGSKASYTVEEVEEPTQNGCPGLAILQKGPCLYRC
SLELPDFTVVSGSFKKKKDAEQSAAQIALEKLGINLSSDNPTAEEAWRELIARVKYIFSN
EFLSALHPLSSHFKAALRRVGDLNASVPASVIAICDGKLNNLCKIINPTVESHPLLVLSY
IMRAAAGLPELVVSAEGQLSIWRKDPYPPNVIESSISQQSDVAESITTTAIYIPCSPEKA
VEPVILNISSTGYYLDVIGQILGLSDANMVLISRTIGKASSETRLYFAAPKSYPLDMSSD
LLNAKVVPFGGPLNAKASSLCGQDIYGDSILASIGYTWKGQDIFHEDVTLQSYYRMLISK
IPSGVYKLSREAILAAELPLTFTTKTNWKGSFPREILSSFCRQYRLLEPVFCVSSIPLKA
SSELSRSNNKPEVSESAEQEREYANENESVDVDPKLAVLGSSFTCEVKIYAKCQDLILEC
APDVLYKKQNDAVQSASLKVLSWLNAYLKDTYMSLEKEKQLANVFDIKFYRQIFFKEVVK
CLSVCNCQHNETLGGKEPELNGVVENDASYINIEGTDSGLCPSNGSLLCVCYSVSLVTKG
ELQKELLESIEEFEFEMGTGAVIPCLEAVVSQMSVGQSACFYTELPPEDLVLAAAKDLAN
ALAFLTSPCCLEYSIILLQVTEPPEDRMEQALFNPPLSKQRVEYAVQHIKEFCATSLVDF
GCGSGSLLESLLEYPTSLETIAGVDISQKSLSRAAKVLHSKLVMKSDFDAPCRSIKSAIL
FDGSITDFDSRLCEFDLATCLEVIEHMEEEQASLFGDIVLSSFRPRILIVSTPNYEYNVV
LQKSNLTSHEDDPEEKIQSQSCKFRNHDHKFEWTREQFQHWASELAVRHKYRVEFSGVGG
AVDLEPGFASQIAVFRRVFLPEDDDSLKDENSASELGKPIQELLSTTIKMRLDNRSRSMN
NTTIFYRWKSI
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggagactggaggatcattggtacaggcaataagaaagcccacgcttacgcctaaagct
attatacaccagaagtttggaagcaaagcttcttatacggtagaggaagtagaggaacct
actcaaaatggatgcccaggattggctatccttcagaaggggccctgcctttatcgctgt
agcttggagcttccagattttactgttgtgtctgggtcctttaagaagaagaaagatgct
gagcagtctgctgctcagattgcattggaaaagcttggcatcaatctttcttctgataat
cccacagcagaggaagcatggagagagttgatagctcgtgttaaatatatattctcgaat
gagttcctttcagctcttcatcctttgagcagtcacttcaaagcagctttacgcagagtt
ggtgatcttaatgcttcagttcctgcttctgttattgctatatgtgacggaaaacttaat
aatctgtgcaaaataattaatcctactgtggagtctcatcctctcttggtcttatcatat
attatgagagctgctgcaggattacctgagttggttgttagtgctgagggacagctttcg
atttggaggaaagatccttatccacctaatgtcatagaatcatcaatttctcaacagtct
gatgttgctgaaagcattacaactacggccatatacataccatgttcacctgaaaaggct
gttgaaccggtgattcttaatatatcatcaacaggttattaccttgatgttattggacaa
atactcggattatcagatgccaacatggttttgatctcgaggactattggtaaagcttca
tctgaaacaagattgtactttgctgctcccaagtcatatcctctagatatgtcatctgat
cttttaaatgctaaagttgttccgtttggaggacctttgaatgcaaaggccagctctctt
tgtggtcaagatatatatggggattcaattttggcatccattggttacacttggaaaggc
caagatattttccatgaagatgtcaccttgcaatcttattacaggatgcttataagtaaa
ataccaagtggagtttacaagttgtccagagaggcaatacttgcagctgagttgcccctg
acgtttactacaaagacaaactggaagggttccttcccgagagaaattctcagttcattc
tgtcgccagtaccggctattagaacctgtcttttgtgtctcaagtattcctttaaaagca
tcatcagagttgtcaagatcaaacaataaacctgaggtttcagaatcagctgagcaagag
agggagtatgccaatgaaaatgaatctgttgatgttgacccaaaattggcggtattggga
agcagttttacttgtgaagtaaaaatatacgcaaagtgtcaagatttgattttggagtgt
gcacccgatgttttgtataagaagcaaaatgatgctgtccagagtgcttccttaaaagtt
ttatcatggttgaatgcatatttaaaggacacatatatgtctttggagaaagaaaaacaa
ttagccaatgtctttgatattaagttttatcgacaaatctttttcaaggaagttgtaaaa
tgcctatctgtttgtaactgtcagcataatgaaactttgggagggaaagaacctgaattg
aatggtgtggtggaaaatgatgcgagttatataaatatagaaggtacagattctggtctg
tgtccatctaatggatcccttttgtgcgtatgttattctgtatctttagtgacaaaaggt
gaacttcagaaggagcttcttgaaagtattgaggagtttgagtttgagatggggactgga
gcggtaattccctgtcttgaagctgttgtctcccagatgtctgtcggccagtctgcttgt
ttctatacagagttgcctcctgaagatttggttttggctgcagctaaggatttggcaaat
gctcttgcattcttaacttcaccttgctgcttggagtactcgatcatcttgttacaggtg
acagaacccccggaagacagaatggagcaggcacttttcaacccaccactttccaagcaa
cgtgtcgaatatgcagtgcaacacattaaagaattttgtgctacttctttggttgatttt
ggatgtggctctggtagtttactggagtctttattggagtatccaacttctttggaaaca
attgctggagttgatatttcacaaaagagcctcagtcgtgcagcaaaggttcttcattca
aaactagtcatgaagtcagattttgatgcaccatgtaggagtataaaatctgccattctt
tttgatgggtctatcacagattttgattctcggttgtgtgaattcgatcttgccacatgc
ttagaggtgattgaacatatggaggaggagcaggccagtctgtttggtgatattgtgctc
agttcttttcgtccaaggattcttattgtttcaactcccaactatgagtacaatgttgta
ctccagaaatccaatctaacaagccatgaagatgatccggaggagaagattcagtcacaa
tcatgtaaatttcgcaaccatgaccacaagtttgagtggacaagagagcagtttcaacac
tgggcatctgaattagctgttagacacaagtatagggttgaattcagtggggttggtggt
gctgttgatctggaaccgggatttgcttcacagattgccgtctttagaagggtgtttcta
cccgaggatgacgacagtctgaaggatgaaaattcggcatcagaactaggcaaaccaatc
caagagctcttgtcgactacgattaagatgcgtttggataatagaagcaggagtatgaac
aatacaaccatattttatcggtggaagtctatatga
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