Gossypium hirsutum (upland cotton): 121203454
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Entry
121203454 CDS
T04793
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
121203454
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
121203454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
121203454
NCBI-ProteinID:
XP_040955056
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All DBs
Position
A03:complement(56126612..56138600)
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AA seq
842 aa
AA seq
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MAEKQLIVAVEGTAAMGPYWQIILSDYLEKIIRCFCSNEFAGQKNTTSNVELSLVAFNTH
GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMSFDVAQMFPIAA
NGNQTHQIADGQRHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQTESRLSDAETVAK
SFPQCSVSLSVICPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFLVLISENFMEGCAA
LSRSGVPSLAPNQSPVKMDMASVTSVAGTSPTSVPSVNGSIMSRQPVSVGNVPTATVKVE
PATITSMANGPAFPHIPSVPRAPFQAVPTLQTSSPLTTTEEVMRSSDNVQEIKPSVGGMT
QPLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSMGQTPVAMHMSNMISSGMTS
SVPLAQTVFSSGQSAMTSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSNIGISQPMC
NVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQSMSGLGPSTVSSGTGTLIPTPGLSQ
QVQSGMQTIGVNNNSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEG
YRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKL
CAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQISSQHQQQQQQMQPLLQQQQMPQ
QQQQQQQQLPQLQQQQQLPQLQQQQQQQPQQQQPLPHLQQQQLPQLQQQQQQQQQLSQMQ
QQQMPQLQQQPQLAQMPQQQQQMVGSGINSAYVQGPGRSQLVSQGQVSSQAPSNMPGGGF
MS
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagcagcttatcgtggccgttgaaggcaccgccgccatgggtccctactgg
caaatcatcctttctgattacctcgaaaagatcatcaggtgtttctgtagtaacgaattc
gcagggcagaagaatactacatcaaatgttgagctttcattggttgctttcaacacacat
ggatcgtactgtgcttgcctagtacaacgtagtgggtggacaaaagatgttgatattttc
ttacaatggctgtcggccatacctttttctggtggtggtttcaatgatgctgcaattgct
gaagggctttctgaagcattgatgtcatttgatgtagctcagatgtttcctattgctgca
aatggaaatcaaacccatcaaattgctgatgggcaaagacattgcattcttgttgctgcc
agtaatccttatcccttgcctacaccagtctatcggccacagactcaaaacttggagcaa
agtgaaaatatggaatcacagacagagagtcgtttgtctgatgctgagacagtagctaaa
tcatttcctcagtgttctgtttctttatctgtgatatgtccgaagcagctttcaaagcta
aaagcaatctacagtgctggaaagagaaacccccgagcatcagatccacctgttgacaat
gttagaaaccctcagtttcttgttctgatttcagaaaattttatggagggctgtgctgct
ttaagtcgctctggagttccaagtttagcacccaatcagagtcctgtgaaaatggacatg
gcttctgtcacttcggttgcagggacatctccgacttctgttccatcagtgaatggatct
attatgagccggcaacctgtttctgttggaaatgttcccactgccactgtaaaagttgag
cccgcaacgataacatctatggcaaatggacctgcttttcctcatattccatctgttcca
cgtgccccatttcaagcagtcccaacgttgcaaacttcttcaccattgacaactactgaa
gaggtgatgagaagtagtgacaatgtgcaagaaataaaaccttctgtaggtggtatgaca
cagcctttacgtcctgtgcctccagcggctgcaaatgtcaacatactgaacaatctttca
caagcaagggtgatgaactctgctgctctcagtggaggaacttctataggacttcaatca
atgggtcaaactccagtggccatgcatatgtccaatatgatatctagcggaatgacatct
tctgtgcctctggctcaaactgtattttcatctgggcaatcggctatgacttcattacct
ggttcaggagctgttacagggactacacaggtcccaccaaactcaaatcttaattcattt
gcttctgcaacttctaatgtggctggaaattcaaacattggaatttcacaaccaatgtgt
aatgttcaaggagcggtgagtatgggccaatcagttcctggcagcatgagccaaggaaat
cattcaggtgcacaattggtgcaaactggagttgccatgagccagagcatgagtggtctt
ggtccatcaactgtttcttctggaactggtacattgattcctactccaggactgtctcaa
caggtacaatctggaatgcagacaattggagtgaacaacaattcagctgctagtatgcct
ctatcacaacagacatcaagtgctttgcaatcagcccaatccaaatatgttaaagtctgg
gagggaaatttatctggtcagaggcaagggcagccggtattcatcaccagattggaaggt
tatcggagtgcctctgcttctgagacacttgcatcagactggccgcaaaccatgcaaatt
gttcgtcttatatcccaggatcatatgaataacaagcaatatgttgggaaggcagatttt
ttagttttcagggcaatgaatcaacatggatttcttggacagctacaagagaagaagctt
tgtgctgtaatccaattgccttcgcagacgttgatgctttcagtttctgataaagcttac
cgcttgatagggatgcttttccctggggatatggttgtctttaaaccacaaatatcaagc
cagcatcaacagcagcagcaacagatgcagccactgctacaacagcaacagatgccacag
cagcagcagcagcagcagcagcagctcccacagctgcaacaacagcagcagcttccacag
ctgcaacaacagcagcagcaacagcctcagcagcaacagccgctcccacatttgcaacag
caacaactccctcagctgcaacaacagcagcagcagcagcagcaactctcccagatgcaa
caacagcagatgccccagttgcagcagcagccacagcttgctcagatgcctcaacagcaa
caacaaatggtcggatcaggaataaattcagcttatgtccaaggtccaggccgatcacaa
ttagtttctcaagggcaagtttcatcgcaggccccatctaacatgcctggaggaggcttt
atgagttga
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