KEGG   Gossypium hirsutum (upland cotton): 121203534
Entry
121203534         CDS       T04793                                 
Name
(RefSeq) polyubiquitin 11-like
  KO
K08770  ubiquitin B/C
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121203534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    121203534
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    121203534
Ubiquitin system [BR:ghi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   121203534
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   121203534
  Exosomal proteins of other body fluids (saliva and urine)
   121203534
  Exosomal proteins of colorectal cancer cells
   121203534
  Exosomal proteins of bladder cancer cells
   121203534
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Dsc3_N Ubiquitin_5 UBL_UBAC1 OTU1_UBXL
Other DBs
NCBI-GeneID: 121203534
NCBI-ProteinID: XP_040932712
UniProt: A0ABM2YQB1
LinkDB
Position
A09:75340140..75342346
AA seq 229 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQMLISAGKQLEDGRTLADYNIQKESTLHLVLRLRGGH
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaacccttaccggcaagaccataacactcgaggtcgaaagctcc
gacaccatcgacaacgtcaaggccaagatccaagacaaggaagggatcccacccgaccag
cagcgtctcattttcgctggcaaacagctcgaagacggtcggacccttgctgattataac
atccagaaagaatccaccctccacctcgtcttacgccttcgtgggggcatgcaaatcttt
gtcaaaaccttaaccggcaagaccatcaccctcgaagtcgagagttccgacaccatcgac
aacgttaaggccaagattcaagacaaggaaggaatcccacctgaccaacagcgtttgatc
ttcgctggcaaacaattggaagatgggaggaccttggctgattataatatccaaaaggaa
tccacccttcaccttgttttgaggcttcgtggagggatgcagatttttgtcaagactttg
acaggcaaaacaatcaccttggaggttgaaagctccgataccattgacaatgttaaggca
aagattcaggataaggaaggaatcccacctgatcagcaaatgctcatctctgccggcaaa
caattggaagatgggaggactttggctgattataacattcagaaagagtctacccttcac
cttgttcttcgtctccgtggtggccactga

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