Gossypium hirsutum (upland cotton): 121204484
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Entry
121204484 CDS
T04793
Name
(RefSeq) DNA repair protein RAD51 homolog 3-like isoform X1
KO
K10870
RAD51-like protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03440
Homologous recombination
ghi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121204484
03460 Fanconi anemia pathway
121204484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
121204484
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
121204484
FA (Fanconi anemia) pathway
Other FA pathway factors
121204484
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
DnaB_C
ATPase
AAA_24
RecA
AAA_25
Motif
Other DBs
NCBI-GeneID:
121204484
NCBI-ProteinID:
XP_040930256
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Position
A08:complement(105365712..105368556)
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AA seq
355 aa
AA seq
DB search
MEIWRLPISASQRGKLISAGYTSLSSLSSISSSDLARELNVSESEAMNILKVASHSRGSE
TSNASCSIVEVLDTFQWWAGAQSAWDMLHDEESLMHITTSSADLDNILGGGIHCKEVTEI
GGVPGIGKTQLGIQIAVNVQIPNDFGGLGGNSIYIDTEGSFMVERAFQIAEACIEDMSEY
NRFLRKDFQECKIKMQPQDILENIFYFRICSYTEQIALINYLDKFLSENKDVKVIVVDSV
TFHFRQDFDDMALRTRVLSGMALKLMNLAKRFSLAVVLLNQVTTKHTEASFQLALALGDS
WSHTCTNRIVLYWNGNERYAYIDKSPSLRSASAAYSVTARGIRNSSSSCKRIKMM
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatggaggctaccaatctcagcatcgcaaagggggaagctaatctcagctggc
tacacttccctctcttctctttcttccatctcttcctctgaccttgctcgagaattaaat
gtttccgaaagtgaagctatgaatattctgaaggttgcatcacatagtagggggtcggaa
acctcgaatgcaagttgttcaatcgttgaggttttggacacgttccaatggtgggcaggt
gcacaaagtgcctgggatatgctccatgatgaggaatcattgatgcacataactacgtcc
tctgcggatctagataacatcttgggtggtggaatacattgcaaagaagttactgaaatc
ggtggagtcccaggcattggtaaaacacagctggggattcaaatagcagttaatgttcaa
attccaaatgattttggtggtctgggtgggaattctatatatatcgacacggaaggcagt
tttatggtggagcgtgcttttcaaattgctgaagcttgcatagaagatatgtcagaatat
aacagattcttgaggaaggatttccaagaatgcaaaatcaaaatgcagcctcaggatatc
ctggaaaacatattttatttccgcatttgtagttatacggagcaaattgccctgataaat
tatttagacaagttcctttcagaaaataaagatgtgaaggtgattgttgtggatagtgtt
accttccatttccgccaagattttgatgatatggcccttaggacccgggtcctcagtgga
atggctttaaagttaatgaacctggccaaaagattcagcttggcggttgttttattgaat
caggtgaccactaagcatacagaagcctcctttcaattagctcttgcactaggtgatagc
tggtcgcatacttgcacaaatcggatagttttgtactggaacggtaacgaacggtatgca
tatattgacaagtcaccttctcttcgatcagcatcagcagcgtattctgttacagctagg
gggatcaggaattcctcctcaagctgtaaacggatcaaaatgatgtaa
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