Gossypium hirsutum (upland cotton): 121204493
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Entry
121204493 CDS
T04793
Name
(RefSeq) autophagy-related protein 3-like
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
121204493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
121204493
04121 Ubiquitin system [BR:
ghi04121
]
121204493
03029 Mitochondrial biogenesis [BR:
ghi03029
]
121204493
Membrane trafficking [BR:
ghi04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
121204493
Ubiquitin system [BR:
ghi04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
121204493
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121204493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
DUF7331
Motif
Other DBs
NCBI-GeneID:
121204493
NCBI-ProteinID:
XP_040930278
LinkDB
All DBs
Position
A08:complement(106182647..106185749)
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AA seq
313 aa
AA seq
DB search
MVLSQRIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPS
KRKSYLPTEKQYLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKDKSD
VEENLPSMETLEIRQNAVRSIPSYFGVGEDEEDIPDMADYEEADNLVETDAATLQPTYLV
AQEPDNDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAHKTV
TIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVTSVIPTIEY
DYTMDFDLGSTST
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggtactttctcagaggattcatgaggcattcaaaggaactgtggaaagaataacaggg
cctcgaaccgtctctgcttttaaagagaaaggagttttaagcgtctccgagttcatcctg
gccggtgataatctcgtatccaaatgccctacctggtcttgggaatctggagagccaagc
aagaggaagtcctatttaccgaccgaaaagcaatacttgattactagaaatgtgccctgc
ctaaggagggctgcgtcagtggaagaagaatatgaagctgcaggaggagaggttcttctt
gataatgaagacaatgatggttggttggcaactcatggtaaacccaaagataaaagtgat
gtggaggaaaacctgccttcaatggagactctagaaataaggcagaatgctgtaagatca
ataccttcttattttggggttggtgaagacgaagaagatatacccgacatggctgattat
gaagaagctgacaatcttgttgagactgatgcggctactttacaaccgacatatcttgtt
gctcaagagcctgataatgacaatattttacggacccgaacctatgatgtcagcatcacg
tatgataaatactatcagactcctcgtgtgtggcttactgggtatgatgagtcaaggatg
ctcttacaaccagagcttgttctggaggatgttagtcaggatcatgcacacaaaacggtt
actattgaggaccatcctcacttacctgggaagcatgcatccgtacatccatgcagacat
ggggctgtcatgaaaaagatcattgatgtgcttatgtcacgtggagtagaacctgaagtt
gataagtatcttttcttgttcttgaaatttgtaacctctgtaattccgacaattgagtat
gactacaccatggactttgatcttggcagcacgagcacttaa
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integrated database retrieval system
