Gossypium hirsutum (upland cotton): 121204508
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Entry
121204508 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase XBAT32-like
KO
K19044
E3 ubiquitin-protein ligase XBAT32/33 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
121204508
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121204508
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121204508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
RING_XB3-XBAT31
zf-C3HC4
zf-RING_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
121204508
NCBI-ProteinID:
XP_040930359
LinkDB
All DBs
Position
A08:complement(33757526..33768111)
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AA seq
497 aa
AA seq
DB search
MRFLSFVGNSFGCSASGERLVSAARDGDLQEAKALLEYNPRLARYSTFGARNSPLHYSAA
QGHHEIVSLLLESGVDINLRNYRGQTALMQACQYGHWEVVQILILFGANIHRADYLNGGT
ALHLAALNGHSRCIRLLLADYIPSIPDCWNILKNKSKDKESTSDFDESALREVINKPADG
GVTALHMAALNGHVESVQLLLDLGASVAEVTVEDGTTIDLIGAGSTALHYAACGGNAQCC
QILIARGASITTTNVNGWSPLMVACSWRKSWLEEILSSKPEGRSQALPSPFLSLPLMSII
RIARECGWRTGDSLFSCQDPCAVCLDRPCAVAAEGCDHEFCTQCALYLCSTNNTTNVAKG
PIGSIACPLCRHGIVSFVKLPGAKPIVKAVARTSLSLSFCTCSSEMLEPTSMTTPLCKPV
VHCARISPPGSSFCSISGQSSLSMKIHSSLCIGVPNTSPLTPCPADQNLRGLRRSASEGR
RSWFSTLNQCVTTGNGC
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagatttctaagctttgtggggaactcctttggatgttctgcatctggggaacgccta
gtttccgccgcaagagatggagatcttcaagaagccaaggctttattggaatacaatcca
agacttgcaaggtattcaacttttggagctcgcaattcgcctctccattactctgctgct
cagggtcaccatgagatagtttcgctcttgcttgagtctggagtagatattaacctcagg
aactatcggggtcagactgctctgatgcaagcttgtcaatatggccactgggaggttgtt
caaattttgattctttttggggccaatattcacagagcagattatctgaatgggggtact
gcactccacttggctgccttgaatggtcattcccggtgcataaggctccttcttgcagat
tatattcctagcattcctgattgttggaatatattaaaaaacaaatcaaaagataaagaa
tctacttcggattttgatgagagtgctcttcgcgaggttatcaataaacctgctgatggc
ggtgtcactgcccttcatatggcagccttgaatgggcatgttgaaagtgttcagctgctc
ctggatttgggagcttctgttgctgaggtcactgtagaagatggaacgacgattgaccta
ataggtgctgggagcactgctcttcactatgctgcttgtggtggaaatgcacaatgttgt
cagattttgatagccaggggtgccagtattactaccacaaatgtaaatgggtggagtcct
ttaatggttgcctgttcatggcgcaaaagttggcttgaggaaatccttagcagtaagcct
gaaggccggtcgcaagctcttccttcaccctttctgtctcttccccttatgagcattatt
agaattgctagagaatgtggatggaggactggtgattccttgttctcatgccaagatcca
tgtgctgtatgtctggacaggccgtgtgcagtagctgcagaaggttgtgatcacgagttc
tgcacacagtgtgccttatacctctgttctacaaataacacaacaaatgtagctaaaggt
ccaattggctcaattgcctgtcctctttgtcggcatggaatagtatcatttgtcaagctt
cctggagcaaaaccaatagttaaggcagttgcaagaacaagtttgtccctgtctttctgc
acatgttctagtgagatgctggagccaacttcaatgacaaccccgctttgcaagcctgtg
gtccattgcgctcgcatttctccccctggatcttcattctgcagcataagtggtcagagt
tccctgtcgatgaaaatccactctagcctttgcattggtgttccgaatactagtccttta
actccctgccctgctgaccagaatttgcgaggcttaagacgctcggcttcggagggcaga
agatcatggttctcaacacttaatcaatgtgtaactacaggcaatggttgctga
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