Gossypium hirsutum (upland cotton): 121204741
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Entry
121204741 CDS
T04793
Name
(RefSeq) protein EXPORTIN 1A-like isoform X1
KO
K14290
exportin-1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
ghi03013
Nucleocytoplasmic transport
ghi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121204741
03008 Ribosome biogenesis in eukaryotes
121204741
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121204741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
121204741
03009 Ribosome biogenesis [BR:
ghi03009
]
121204741
03016 Transfer RNA biogenesis [BR:
ghi03016
]
121204741
03036 Chromosome and associated proteins [BR:
ghi03036
]
121204741
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121204741
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121204741
Pre-60S particles
121204741
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121204741
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121204741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
121204741
NCBI-ProteinID:
XP_040931120
LinkDB
All DBs
Position
A08:complement(124470536..124483633)
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAEKLKDLSQPIDVPLLDATVAAFYGTGSKEERAQADQILRHLQNNPDMWLQVVHILQQ
TKSLNTKFFALQVLEGVIKYRWNALPAEQRDGMKNYISEVIVQLSSDEASFRAERLYVNK
LNIILVQILKHDWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRTELIRAMLSTLHAFLSWIPLGYIFESTLLET
LLKLFPVPSYRNLTLQCLTEVAALSFGDYYNVQYVKMYNIFMVQLQSILPPTTNIPEAYA
QGSSEEQAFIQNLALFFTSFYKFHIRVLETAQDNISMLLMGLEYLINISYVDDTEVFKVC
LDYWNSLVLELFDAHHNMDNPAVTANMMGLQVPLLSGMVDGLGAQLLQRRQLYAGTMSKL
RMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQM
LKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEDQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGENEPFVSELLSALATTVADLEPHQIHTFYESVGHMIQAESDPHKRDEYLQR
LMALPNQKWGEIIGQARQSVDVLKDQDVIRTVLNILQTNTSVASSLGTYFLSQISLIFLD
MLNVYRMYSELISTSIAEGGPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQF
VPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKAAMIDDVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATHCFHALIQLSSQQLKLVMDSIVWAFRHTERNIAETGLNL
LLEMLKNFQASEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLILQQLFCLVESSL
LTEPLWDAATVPYQYPNNGMFVREYTIKLLSTSFPNMTAAEVTQLVNGLFESRNDLSTFK
NHIRDFLVQSKEFSAQDNKDLYAEEAALQRERERQRMLSIPGLIAPNEIQDEMLDS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgagaagcttaaggatttgagtcagccgattgatgttcccttactggacgcc
accgtcgcggccttttatggcaccggatctaaagaagagagagcacaagcagatcaaatc
ttacgacatctgcaaaacaatccagatatgtggcttcaagttgtgcacattttgcagcag
acaaagagcctgaacaccaagttctttgccttgcaggttcttgaaggtgttatcaagtat
aggtggaacgcgttgcctgctgagcagcgagatggaatgaaaaattacatttctgaagtc
attgtccagttgtcaagcgatgaggcctcctttcgagcagaaaggctgtatgtcaacaag
cttaatatcatattggtccagatcttaaagcatgattggcctgctagatggcgaagcttc
attcctgatcttgttgcagctgcaaaaactagtgaaacaatatgcgaaaattgcatggca
atactgaaacttctaagtgaagaagtttttgatttctcaagaggtgaaatgactcagcaa
aaaatcaaagagcttaaacaatcgctgaacagcgagtttcaactcattcatgagctatgc
ttgtatgtactatcagcttctcagagaaccgagcttatacgggctatgctatccacgttg
catgcatttctttcatggattcctctgggctatatttttgagtcaacattgctggaaacg
ctcctaaaattattccctgtgccatcatatcgaaatctcaccctccaatgtctaacagag
gttgcggccttaagttttggggactattataatgtgcagtatgttaagatgtacaacata
ttcatggtccagctacagagtattctcccaccaaccacaaacatccctgaggcttatgca
cagggaagcagtgaagaacaggcattcattcagaacttggcactgttcttcacttcattc
tacaagtttcacattcgggtgctagagactgcacaagacaatatttctatgctgttaatg
ggtctggagtaccttattaacatatcttatgtggatgatacagaggtctttaaggtttgc
ctggactattggaactccttggtcttggagctatttgatgcacatcataacatggataat
cctgcagtaactgcaaacatgatgggactgcaggtgccgttgctttctggtatggttgat
ggcctcggtgcccagcttctgcaacgccgccaactttatgctggtacgatgtcaaagttg
agaatgctcatgatctgtcgtatggctaagcctgaggaggttctgatagtcgaagatgaa
aatggaaatattgttcgagagacaatgaaagataatgatgttcttgttcagtataagatt
atgagggagactttgatctatttgtctcacctagatcatgaggatactgaaaagcagatg
ctaaagaaattgagcaagcaattgagtggtgaggattggacttggaacaatttgaacaca
ttatgctgggcaataggatctatttctggttccatgatggaagatcaggaaaacaggttt
ttggtaatggtcattcgtgatttgctgaatttgtgtgaaatcactaaagggaaagacaat
aaagctgttattgctagtaacattatgtatgtcgttggacagtatccaaggtttttaagg
gctcactggaaatttctgaaaactgttgtaaataagctgtttgagttcatgcatgaaaca
catccaggagttcaggatatggcctgtgacacattcttgaaaattgttcagaaatgcaag
cgaaaatttgtgattgttcaggttggagaaaatgaaccatttgtatctgaacttctatct
gctcttgcaacaacagttgctgatctagagcctcatcagatccataccttttatgaatct
gttgggcatatgattcaagctgaatctgatccccataagagagatgaatatttgcagaga
ctgatggcgctccccaaccagaaatggggtgaaattattgggcaggcacgtcagagtgtt
gatgtccttaaagatcaggatgtgataagaactgtactaaacatactgcagacaaatact
agtgtggccagttctcttggaacatatttcttatcccagatttctttaatattcctggac
atgctcaatgtatacagaatgtacagtgagcttatatcaactagtattgcagaaggtgga
ccctttgcttcaaaaacatcctatgtcaaactcctacgatctgtcaagagagagactctt
aagctcattgagacatttttggacaaggcagaagaccaaccacaaattgggaaacaattt
gtgcccccaatgatggatccagttcttggtgactatgctaggaatttgcccgatgctaga
gaatctgaagttttgtcactttttgcaacaataatcaacaagtacaaagctgcaatgata
gatgatgttccccgtatatttgaagctgttttccagtgcacgttggagatgataaccaaa
aatttcgaagattacccagagcatcgcctaaaattcttttcattgcttcgtgccattgct
actcattgtttccatgcacttattcagttgtcaagtcagcaactaaaacttgttatggat
tcaattgtttgggcattccgacatacggagagaaatattgccgaaactggtttaaatctt
ctactggagatgctgaaaaactttcaggcttctgaattttgtaaccagttctaccgaacc
tactttctgactattgagcaagaaatttttgccgtcttgacagacacatttcacaaacct
ggctttaagttgcacgtcttgattctacagcagctgttctgcctggttgagagcagtttg
ttgactgagcccttgtgggatgctgctacagttccatatcagtatccaaataacggaatg
tttgttcgtgaatacacgataaaacttcttagtacatcatttcccaacatgacagcagct
gaggtcactcaattggtgaatggactatttgagtcaagaaatgatctgtcaacatttaag
aatcacatacgggactttcttgtgcaatcaaaagaattttcagctcaggacaataaagat
ctctacgcagaagaagctgctttacagagggaaagagaacgacaacggatgctttcaatc
ccagggctgattgccccaaatgaaatacaagacgagatgttggactcgtag
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