Gossypium hirsutum (upland cotton): 121204913
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Entry
121204913 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC121204913
KO
K14315
nucleoporin NDC1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121204913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
121204913
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121204913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
121204913
NCBI-ProteinID:
XP_040931640
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Position
A08:4947858..4952949
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AA seq
492 aa
AA seq
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MCSWTAAESDMVVKNRLVGFLLWQSILSSLIFLAFTITIVSWRSATAIFVSFFSFHLSQL
LFSVSLSTVLSPQPKFRRSFPVLLTAAAVSGSLSAVSFCGFNGRVGFKGFASGLFYASFY
VYKRRWVLQFPIIQRPLFFSFKMGIPSAIIRALKLSAAAYLFSALLLVFLPHHFSTDLKL
GNFFIQHIISYAACFSMFLCWELTHHLHQVLHTKRFIFAPPKGSAAAETNPSEPLLATLE
ESSPASLLKYLAYLDLCMVCENNVDYWRRAAFFEETGETYKRVAAVCLRPLEQLASKLVQ
GFEGSSDDKTFSISDQLQSPTNPRQNSKCHELVNDFQVYTWSARALASLTSRSRREDRFG
VAQLSGSNAAAISTLIACLLAVETLMGKKISLQPSHQLMGAFSTKSATFSTGRRDVRTGK
RRDDPLYSKAYAMADVLRTSIYGIVSAFHHEMLTSAKAGLLEKDWITSSKPPFGTRELLL
QKLHLFLDFQAS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcatggactgcagctgaatcagacatggtagtgaagaaccggttggtagggttc
ctactatggcaatcgattctaagtagcttgattttcttggccttcactataacgatcgtc
tcctggcgctccgccactgcaatcttcgtctcctttttcagctttcatctgtcccagctg
ttgttctctgtgtccctctctaccgtcttatctccccaacctaaatttagacgtagtttt
ccggtgttgctgacggccgccgctgtttcgggttctctctcagctgtgtctttttgtggg
ttcaatggaagagtgggttttaagggttttgcttccgggttattctacgcttctttttat
gtttataagcggcgatgggtattgcagttccccatcattcagcgtccccttttctttagc
ttcaagatggggatcccttccgccattattagggcattgaagctttctgctgcagcttat
ctattttcagcactgctgttggtatttctgccacaccattttagcactgatctcaagctc
gggaacttttttattcaacacataatctcctatgctgcctgcttttctatgtttctctgt
tgggagttaactcaccatttgcatcaggtgctacatactaaaaggttcatatttgcacca
ccaaaaggatcagctgcagcagaaacaaatccaagtgagcctctcctagctacattagag
gagagctctccagcttctcttctgaaatatcttgcataccttgatctatgtatggtttgt
gagaataatgttgactactggcgtcgagctgccttctttgaagaaactggtgagacttac
aaaagagttgcagctgtatgtttgagacctttggagcagcttgcatcaaagttggtccaa
ggttttgaaggttcttcagatgataaaaccttctcaatatctgatcagttgcagtcacca
actaacccccgacagaattcaaaatgccacgagctagtgaatgacttccaggtatacaca
tggtctgctcgagcacttgcttccttaacttcacgctcgcgtagggaagaccgatttgga
gttgctcaactatctggtagcaatgctgctgccatctcaacactcatagcttgtttactt
gctgttgaaacattgatggggaaaaaaataagcttacaaccatctcatcagttaatggga
gcattcagcacgaaatcggctaccttcagtactggaagaagagatgttaggacaggaaaa
aggagagatgacccactatattctaaagcatacgcaatggctgatgttttaaggacttca
atttacggcattgtgtctgctttccaccatgagatgctgactagtgccaaagcaggtctt
ctcgagaaggattggattactagtagcaaacctccttttggaactcgtgagttgctgttg
cagaaattgcatcttttccttgacttccaagcaagttaa
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