Gossypium hirsutum (upland cotton): 121206157
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Entry
121206157 CDS
T04793
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1-like isoform X1
KO
K27807
short internodes/stylish family transcription factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
121206157
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121206157
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GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
121206157
NCBI-ProteinID:
XP_040932449
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Position
A09:68132565..68134639
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AA seq
356 aa
AA seq
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MGMVGLRDFVVVAPASFNHHHHHHHHHHTQDPIMSNDQISGPSASTALGVGVGVFPLLTA
APCLAPLNVEDPDLFNNNGRTKLSGMQLWQDQNSSPHNYLKKPSSFPDSNNSSSMKLIQS
SGGGGIGDGESGGSGSSSATTCQDCGNQAKKDCSHKRCRTCCKSRGFDCPTHVKSTWVPA
ARRRERQLMAAAVTTAGAGSSGSTSGAKKPRLITSQNTTTSHTSTSNTTPRSFDTSSSNQ
DAGFKETLPGQVRAPAVFKCVRVTAVEDGDDEFAYQAIVKIGGHVFKGFLYDQGVEGRDG
FPNISELHLGGGPGSGGNGGGGRNGGSSSSPVLDPSEVYAATGGCFLGSSYGNPIN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggggatggttggtctccgagatttcgtcgttgttgctcctgcctcgtttaatcaccac
caccaccatcatcatcaccatcatactcaagatcccatcatgtcaaatgatcaaatcagt
ggtccaagtgcttccaccgcacttggtgttggcgttggcgttttcccgcttcttacagca
gctccatgtctagctccactgaatgtggaagaccccgatttgttcaataacaatggtcgt
accaagctcagcgggatgcagttatggcaggatcaaaattcttcccctcacaattatctt
aaaaaaccatcctcattccctgatagcaataattcgtcttctatgaagttgatacaaagc
agtggcgggggtgggattggagatggagagagtggtggttcgggatcaagctcagcgacc
acgtgtcaagattgcgggaaccaagctaagaaagactgttcccataagagatgtagaaca
tgttgtaaaagccgaggttttgattgccctactcacgtgaagagcacgtgggtacccgct
gctaggagacgagaacgtcagctcatggcggctgcagtcaccactgctggtgctggctcg
tctgggtcgacttccggagctaagaaaccgagactcataacttcgcagaacacaactact
tctcatacatcaacttcaaacactactcctagaagctttgacactagctcaagtaaccaa
gacgcaggttttaaagagacactgccggggcaagtacgtgcaccggcggtattcaagtgc
gtcagagtgacagcggtggaggacggtgacgatgagtttgcatatcaagcaatcgttaag
attggtggacatgttttcaaagggtttctttatgatcaaggagtcgaaggaagagatgga
ttccctaatatatctgaattgcatttaggtggtggcccaggcagcggtggcaatggtggt
ggtgggagaaatggcggatcatcgtcgtctccggttcttgatccttctgaagtttatgca
gccaccggaggttgctttcttggttcaagttatggtaatccaataaattaa
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