Gossypium hirsutum (upland cotton): 121206692
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Entry
121206692 CDS
T04793
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
121206692
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121206692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
PspA_IM30
Prenyltrans
SidC_lipid-bd
P4Ha_N
Motif
Other DBs
NCBI-GeneID:
121206692
NCBI-ProteinID:
XP_040933694
UniProt:
A0ABM2YT50
LinkDB
All DBs
Position
A09:31223733..31227990
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AA seq
519 aa
AA seq
DB search
MGSSFNPQILVEKLAKLNNSQASIETLSHWCIFHMNKAKQVVETWDRQFHCSPREQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIESGDEFGRNAALRLISIWEERKVFGS
RGQILKEELFGRQPESNNRNGRHINPKLLKQPVGDTVDKIVSGYQFLYCSQMDEDVIFSK
CRNAISCMEKVDKEISTDVNSGQFCGSALVGEVQGQHAALRDCIEQLTAVASSRVNLISH
LREALKEQEFKLEQVRSQLQAAQSRAEQAGNICRQLLNCDNPELASEQSSKESFIPEATE
QSAPLMYARQVSFPRNSGQTEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVLG
NPMKESSGDYSSEKRPKLENDQPYIPSQNLQQALVPPCSHPESHLRNVATTTRQLTPNEV
PPPTSSSSSPLRPVSAMAPYAVSQYMPTTGLINGAAYSYGMTTASQQHSLPGYSVVGGAI
TGLFPFPTPLTNISYQSFQGSEVFYNQPSSVPAAPNSRH
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggcagttcatttaatccccaaatcttagtagaaaagctggccaagctcaataactcc
caagcaagcatagagactttatcacattggtgtattttccatatgaataaggcaaaacaa
gttgttgaaacttgggacagacaatttcattgctctccacgtgagcagagattggccttt
ctgtatcttgccaatgacattttgcagaatagcaggcgtaagggttcagaatttgttggt
gaattttggaaggttcttcctgatgcacttcgtgatgtgattgaaagcggggatgagttt
gggaggaatgctgcattacgtctgatcagtatatgggaagagagaaaagtgtttggttct
cgaggacaaattcttaaggaagagctttttggcagacaaccagaaagtaataatagaaat
ggcaggcatataaatcccaaactgctgaagcagcctgtcggagatactgtggataaaata
gtttcaggttatcaatttctatattgtagtcagatggatgaagatgttatattcagcaaa
tgtaggaatgctattagttgtatggagaaagtagataaggaaattagtactgatgtcaat
tcagggcagttctgtggatcggcacttgtgggggaggtgcagggtcagcatgctgcactg
agggactgtattgagcagttaacagctgttgcatcgtcaagagttaatctcatctcacat
ttgagagaggctcttaaggagcaggaattcaagctggagcaagttcgttctcagcttcag
gctgcacagtctcgagcagaacaggctggtaatatctgcagacagttgttgaattgtgac
aatcctgagttagcatctgagcaaagctcgaaggaaagttttattccggaagctacagaa
caatctgctcctcttatgtatgcccgacaagtatcctttcccaggaattctggccaaact
gaggaagatcctaggaaatctgctgcagctgcagtggcagcaaagctaactgcatcgaca
tcctcagcccagatgctttcgtatgtcctctcttctcttgcttctgagggtgtccttgga
aatcccatgaaagaatcttccggtgattattcatctgagaagaggcctaagcttgagaat
gaccagccatacataccatctcagaatctgcagcaagctttagttccaccatgctcgcat
cctgaatctcacctgcgcaatgtagcaaccaccacccggcagttaactcctaatgaagtg
ccacctcctacatcgtcatcttcttctcctttaagaccagtgtcagcaatggcaccatat
gctgtgtcccaatacatgccaactactggattgataaatggtgcagcatatagctatggg
atgacaaccgcatcacagcagcattccttgcctggttattcagtggttggaggtgcaatt
actggtctcttcccatttccgacaccattaaccaatatttcttaccagagttttcaaggt
tccgaagttttctacaaccagccctcatccgtgccagcagcaccgaattctaggcattag
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