KEGG   Gossypium hirsutum (upland cotton): 121208537
Entry
121208537         CDS       T04793                                 
Name
(RefSeq) autophagy-related protein 8C
  KO
K08341  GABA(A) receptor-associated protein
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    121208537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    121208537
   04121 Ubiquitin system [BR:ghi04121]
    121208537
   03029 Mitochondrial biogenesis [BR:ghi03029]
    121208537
Membrane trafficking [BR:ghi04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    121208537
Ubiquitin system [BR:ghi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   121208537
Mitochondrial biogenesis [BR:ghi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    121208537
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 121208537
NCBI-ProteinID: XP_040935395
LinkDB
Position
A10:complement(986715..989289)
AA seq 123 aa
MAKSSFKLEHPLERRQAEAGRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLSAEKAIFVFVKNTLPPTAALMSAIYEENRDEDGFLYMTYSGENTFGSPL
LLA
NT seq 372 nt   +upstreamnt  +downstreamnt
atggcgaaaagttccttcaagcttgaacatcctttggaaaggagacaggctgaagctggt
cgaatcagggaaaagtatcccgacagaattcccgtcatcgtcgagaaagccgaacgaagt
gacattcccgatattgacaaaaagaagtatctcgttcctgctgatttgactgtggggcag
tttgtttatgttgttcgtaaaaggattaagcttagtgccgagaaagctatatttgtcttt
gtgaagaacactctcccacctactgccgccttgatgtccgctatttacgaggaaaacagg
gatgaagatggttttctttacatgacttacagtggagaaaacacatttggttccccttta
cttttagcttga

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